KEGG   Tigriopus californicus (tidepool copepod): 131890343
Entry
131890343         CDS       T09700                                 
Name
(RefSeq) probable tyrosyl-DNA phosphodiesterase
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    131890343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcf03400]
    131890343
DNA repair and recombination proteins [BR:tcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     131890343
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH DUF5576
Other DBs
NCBI-GeneID: 131890343
NCBI-ProteinID: XP_059095660
LinkDB
Position
11:6721077..6722937
AA seq 537 aa
MSLPSEACFFGEKCFRKNPHHFREYSHPHLVALIAQFGTTDPPQTKSIEVAHKVILIQLK
MLRELFPSLVKAKRDSPPVKRSKLDPESSQVAANSTEKKSLILRKLESAAPFYFFLTKVK
DSPQTHRDLRSVYITELLHPSLGTIKKSLQINFMIEWAWLQMNYEETGNQDKPLLLIYGD
DNPELMPVGNLPSNVRAQRVKPRYPFGTHHTKMMLFHYDDGSVRVVVSTANLIGSDWTNR
TQGLWISPRCPTLPSSSASSNLAELGESRTRFKASLLRYLKYYELSALREYIEAVKQCDF
SAVNVFLIASVPNSHRGPDLNLWGQKALANRLKQNIKTDIGHWPLIMQCSSIGSLGPAPE
SWLRGELAQSMCTTGQISSGTSPNVKLIYPSRQNVMDSYDGILGGGCLPYSQKTHLKQPW
LRDYLHEWRCDIRHRSRAMPHIKCYTRINPEGDKAAYFLLTSANLSKAAWGSFNKAKDGL
MIMSYEAGVLFLPQFVTGQAWFNLENQFNLPYDWPLKKYEAGVKPWFMDYLRTALAD
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgtcgttgccatccgaggcttgcttctttggggagaaatgcttccgtaagaacccgcat
catttcagagagtattctcacccgcatttggtggcactcattgcccaattcggtaccact
gatccaccccaaaccaaatcaatcgaagtggctcacaaagtgatactgattcagttgaaa
atgttgagagaactgttcccgtcgttggtcaaagctaaacgcgactctccaccagtcaaa
aggagcaaactggatccggaaagctcacaggttgccgccaatagcaccgaaaagaaatcg
ctcattttgagaaaactggaaagtgccgctccattctactttttcttgaccaaagtgaaa
gattctccgcaaacacatcgagatctcagaagcgtctacataacggagcttttgcatccc
agtctaggtacaattaagaaaagtctgcaaattaatttcatgattgagtgggcgtggctc
caaatgaactacgaggagaccggcaaccaggacaagcctttgcttctcatttatggggat
gacaatcccgaactgatgcccgtcgggaacctgccttccaatgtccgcgctcagcgggtc
aagccccgatatcctttcggaacgcatcacactaaaatgatgctttttcactatgacgac
ggttccgttcgtgtcgtggtctccaccgccaatttgatcggctcggattggaccaatcgg
actcaagggctctggatcagcccccgatgtccaaccttgccctcctccagtgcgtcctca
aacctagccgaattaggcgagtcccggactcgcttcaaggcctcgcttctgagatacctc
aagtattacgaactctccgctctccgggaatacattgaagccgtaaagcaatgtgacttc
tcagccgtgaacgtctttcttatcgcttccgtgcccaattctcacaggggcccggatctg
aatctatggggacaaaaggctctggccaatcgattgaagcagaatatcaaaactgatatc
gggcattggcctttgattatgcaatgctcttccattgggagtcttggacctgcccccgag
tcttggctaagaggagaattggcccaaagtatgtgcaccacaggtcaaatcagttcaggc
acgagccccaacgtcaagttgatctatcctagtcgccagaatgtcatggacagttatgat
gggattttggggggtggatgtctgccctattcgcagaaaacccatttaaagcaaccttgg
ttgcgcgactatttgcatgagtggcgatgtgatatcaggcatcgatctcgagccatgccg
cacatcaagtgttacacccgcattaatcccgagggcgacaaagcggcctattttctgctg
acgagtgcgaatttgtccaaggccgcgtggggcagttttaacaaggccaaggatgggctg
atgatcatgtcctacgaggctggagtgttattcctgccacaatttgtcaccggtcaggcc
tggtttaatctcgagaaccaattcaatttaccctacgattggccgctcaaaaaatatgaa
gcgggtgtcaaaccttggtttatggactacttaaggacggctttagccgattaa

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