Tigriopus californicus (tidepool copepod): 131890418
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Entry
131890418 CDS
T09700
Name
(RefSeq) chromatin-remodeling ATPase INO80-like
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131890418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcf03036
]
131890418
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
131890418
INO80 complex (yeast)
131890418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
COG4_m
Motif
Other DBs
NCBI-GeneID:
131890418
NCBI-ProteinID:
XP_059095739
LinkDB
All DBs
Position
11:complement(10535317..10542976)
Genome browser
AA seq
1510 aa
AA seq
DB search
MADPPTSLLSEWLAPLTPVARPHPSSLLHRNVGGPPAPPRLSASPPKVAAASGLSRTARV
ARGRKPRNGDRSSAGPGRAGAVAASPEALRLEQALNVDPFVRYVASLNARTASQYSSDDE
DEVLVAFERESAAAPNLTKKQVQQFDKVKRSRRYLDKDVGPELDSQDDTEAEDLFLNEVE
LFESVKAHQKRKRLRKRVRVAPEISVKKKAADPTQSEKVEDDATLDEDSTSFQKFSAIKS
GPGRKKGSKNTGPLTLDQLKARRKRLWVSIMKKEISKAQKARNYTQKEKLTNSKKVAAQC
MRQARQKAMQSQRVMKESVWRAKRLTREMQAYWKRFDRVEKQQKRQQEQEAEKQQKMDLQ
LLETKRQTRKLNFLITQTELYAHFIASKIGADKTNQEADILKKLEDEAEAGSRLAQIDDY
NSMEAKTLAINNASQAWEEHEQKKRSYDVKSNDGGEIVGGEANDDRTQPSIFNGKLKAYQ
LRGLNWLMNLYDQGINGMLADEMGLGKTVQALSMLAYIAEKYEIWGPFLVITPASTLHNW
QQEVAKFVPSFKCVPYWGSPQERKVLRHFWDQKELNTKSASFHLVITSYQLVVSDFKYFN
RIKWQYLVLDEAQAIKSSSSQRWKLLLEFKCRNRLLLSGTPIQNSMAELWALLHFVMPTL
FDSHDEFNDWFSKDIESSAENKSQVDEKQISRLHMILKPFMLRRIKKDVENELTDKVEVL
MYCPLTIRQKLLYMGLKRKIRIEDLLQGLGSQSQNSTLTSSLMNLVMQFRKVCNHPELFE
RREARSPFVMKIDPFVMPKLVFHENIHSGAISTNNHLLYNKLSVFNPVHVHESLKQRRSH
ERLDVCDSSFSYLRFVDVSIGEQYDLCLSLLKKFVHLIRTHQRLRVAQLAELFHENPCNP
SSHHLNSLLLGSRLKSATTNSELRSLIFTHNQDDQVLQHLDVTLSSMPETISHRLIRTRQ
KLISHRRKKAMESAAKNCDKAPLDPVIVVDEDEIHQRLVDEIDHVERPSLLLKCQPCSVP
SFLLDTCPNVATPGHVQYVQDRLAAYKLDDHIQCNSQEGRDIVLFGSPELRLHWERSRRE
YFHPVSVGGIQALKPSRGWSNIIIPDKQTLVTDSGKLHVLDGLLTRLKEEGHRVLIYSQM
TRMIDLLEEYMVHRKHTFMRLDGSSKISERRDMVADFQQRSDIFVFLLSTRAGGLGINLT
AADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQR
MVIQGGSFKGKPGELKPKEVVSLLLDDDEIEKKYRDKEAEINHDISDSPLPTKKRRPSES
LEPEPNAKKPKFEDSLFNIDDTSQLSVDSPGLTIDVDAMSDVTSSRGPTRPQSPIFDFMG
EKLGPKRSKRGTGGKRGRPRGSKNKGRDEMEPASQEVSAILIPNGVIPQNPPMKRGPGRP
RIKPGGGPLHQGTRGPPPKQAKPSKLKSKGLPAALAATLSAKYNNSGSMNAASPGSSGPK
FYTDSSNASS
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccgcccacctccctgttgagcgaatggctggcgccgctcaccccggtggcc
cggcctcatccgtcatccctgctccatcggaatgtgggcgggcctccagcgccgccaagg
ttgagcgccagcccgccgaaagtggcggccgcgtcgggcttgagccggacagcgcgggtg
gcgcggggtcgcaagccacgcaatggtgatcgatcgagtgcgggcccaggccgggcgggc
gcggtggcggcttcgcccgaggccctccgcttagagcaggcgctcaatgtggacccattt
gtgcgctatgtggcctcgctcaacgcccgaaccgcctcgcaatattcctcggacgatgag
gatgaggtgttggtggcctttgaacgggaatcggcggccgcgcccaatttgaccaagaaa
caagtccaacagtttgacaaggtcaaacgaagtcgacgctatctcgacaaggacgtgggt
cctgaattggacagtcaggatgacaccgaggccgaggacctcttcctcaatgaagtcgaa
ctcttcgaatccgtcaaggcacatcaaaagcgcaaacgtctccgcaaacgcgtgcgtgtc
gcccccgaaatctcggtcaagaaaaaagccgctgaccctactcaatcggagaaagttgag
gacgatgccactttggatgaggattcgacttccttccaaaagttctcggccattaaaagc
gggcccggacggaaaaaagggtccaaaaacactggcccactcaccttggaccaactcaag
gcccgtcgaaaacggctgtgggtatctattatgaagaaggagatctcgaaggcccagaaa
gcccgcaattacacccaaaaggagaagctcacgaatagcaaaaaagtggcggctcaatgc
atgcgacaagcccgccaaaaggccatgcaatcgcaaagagtcatgaaggaatccgtttgg
cgggccaagaggctcacccgcgaaatgcaggcctactggaagcgattcgatcgggtcgag
aagcaacaaaagcgtcaacaggagcaagaggccgagaaacaacagaagatggaccttcaa
ttgcttgagaccaaacggcagaccaggaagctgaatttcctgatcacgcagaccgagctc
tacgctcatttcatagccagcaagattggcgccgataaaaccaaccaagaagccgacatc
ctgaagaagctggaagatgaggccgaggctggcagtcgattggctcaaatcgatgattac
aacagtatggaggccaaaaccctggccatcaacaacgcttcacaggcttgggaagaacac
gaacagaagaaacgcagttatgacgtcaagtcaaatgatggcggcgaaatcgtgggcggc
gaggctaacgacgatcgaacccaaccctccatattcaacgggaaactgaaggcctatcaa
ttacggggcttgaactggctcatgaatctctacgaccaaggaatcaacggcatgttggcc
gacgaaatgggcttgggcaagaccgtgcaagcactttccatgttggcctatatcgccgaa
aaatatgagatttggggcccattcctggtcatcacccccgcctcaacgttgcacaattgg
cagcaagaagtggccaagtttgtgccatctttcaaatgtgtcccatattggggctcaccc
caagagcggaaagttctacgccatttctgggatcagaaggagctgaacacgaagagtgct
tcgtttcatctcgtgatcacaagctaccaacttgtggtgtctgacttcaagtatttcaat
cggatcaagtggcagtatttggttctggatgaggctcaagccatcaagtcctcatcgagt
caacgatggaaactcttactcgagttcaagtgtcggaaccgcctacttttgtctgggacg
cccattcaaaactcgatggctgaattgtgggccttgctgcatttcgtgatgcccacatta
ttcgactctcacgatgaattcaacgattggttctccaaggacattgaatcgagtgccgag
aacaagtcgcaagtggatgaaaagcaaatctcacggttgcacatgatcctgaagcccttc
atgttgagacgaatcaagaaggacgtcgaaaacgaactgaccgacaaagtcgaggttcta
atgtattgtccattgaccattcgacagaaactgctctacatgggattgaagcgcaagatt
cggatcgaggatctcctccaaggactcggatctcagtcacaaaactcaaccctgacatca
agtctcatgaacttggtgatgcaattccgaaaggtatgcaatcaccctgaattgtttgaa
agacgagaggcccgctctccttttgtgatgaaaatcgatccctttgtgatgcccaaactc
gttttccatgaaaacattcattccggtgccatatctaccaacaatcacctcttgtacaac
aaactctccgttttcaacccggttcatgtccatgaatcactaaagcaacgtcgcagccat
gaacggctggacgtgtgtgatagctcattctcgtaccttcgctttgtggacgtatcgata
ggggagcagtacgatctgtgtctgtctcttctcaagaaattcgtccatctgattcgaacc
catcaacgtctgagagtggctcaattggcggaactattccacgagaatccttgcaatcct
tcatctcatcacctgaactcgttgctccttggatcgagactcaaatccgcaaccaccaac
tcggaactgagaagtctcattttcacgcacaaccaagacgatcaggtcttgcaacacttg
gatgtgacattgagctccatgccagaaaccatcagtcatcgactgattcgcacccgtcaa
aagctgatcagtcatcggaggaagaaagccatggaatcggctgccaaaaactgtgataag
gcccctcttgatccagtcattgtcgtggatgaagatgagattcaccaacgtctggtcgat
gaaatcgatcacgtggaacgaccttcgctccttttaaagtgccaaccctgttctgtgccc
agcttcctattggacacgtgcccaaatgtggctacacctggtcacgttcagtacgttcag
gatcggttggccgcctataagctggatgatcatattcagtgcaatagtcaggagggtcgg
gatatcgtgctgtttggttccccagagctcagacttcattgggagcgaagtcgacgagaa
tacttccatccggtctcggtcggcggtattcaagccttgaaaccctcgcgtggctggtcg
aacataatcatccctgacaagcaaactttggtgacggattcggggaagctccacgttctg
gatggattgctcactcgactgaaagaggaaggccatcgggtcctgatctattcgcaaatg
acgcgaatgatagacctgctagaagagtacatggtccatcggaagcacacattcatgcga
ttggatggaagttccaagatctcggaacgacgagatatggtggcagatttccaacaacgt
tcagacatctttgtgttcttgctctcaactcgagctggaggattgggcatcaatctcacc
gcggctgacacggtaatattctacgacagcgattggaacccaacggtggatcaacaagcc
atggaccgagctcatcgtttaggtcagacgaagcaggtgaccgtgtatcgactcatttgc
aaaggaaccattgaagaaaggatcctccaaagagcccgagaaaagtcagagatccaaagg
atggtcattcaaggaggaagtttcaaaggcaaaccgggcgagctcaagcccaaagaagtt
gtttcgctcctgctcgacgatgacgagatcgagaagaaataccgagacaaggaggccgag
atcaaccacgacatctcggattcgcccctcccaaccaagaaacgaagaccttcggagtct
ctggagcctgaaccaaatgccaagaaacccaagtttgaagactccctgttcaatattgac
gacactagtcagctgagtgtagacagccccgggctaacgattgacgtggatgccatgagt
gacgtgacttcctcccgaggcccgacacgtcctcaatcccccattttcgacttcatgggc
gagaagcttggtcccaagcgatccaaacgaggaaccggtggaaaacggggtcgcccacga
ggttccaaaaacaaaggccgagatgagatggaaccggctagtcaagaagtgagcgctatt
ctcataccgaacggagtgattcctcaaaatccgcccatgaaacgaggcccaggtcgtccc
cgaatcaaaccgggcggaggaccattacatcagggaacaaggggtccaccacccaaacaa
gccaaaccatcgaagcttaagagcaaaggcctacctgcggctttagcggccacgttatct
gctaaatataataatagtggctcaatgaatgccgcttcccctggatcgtcgggaccgaaa
ttctacacggattcatccaatgcgtcgtcttga
DBGET
integrated database retrieval system
