Tigriopus californicus (tidepool copepod): 131890613
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Entry
131890613 CDS
T09700
Name
(RefSeq) tubulin alpha-1C chain-like isoform X1
KO
K07374
tubulin alpha
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04145
Phagosome
tcf04517
IgSF CAM signaling
tcf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
131890613
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
131890613
09142 Cell motility
04814 Motor proteins
131890613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131890613
03036 Chromosome and associated proteins [BR:
tcf03036
]
131890613
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tcf04812
]
131890613
04147 Exosome [BR:
tcf04147
]
131890613
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131890613
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
131890613
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
131890613
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131890613
Exosomal proteins of other body fluids (saliva and urine)
131890613
Exosomal proteins of colorectal cancer cells
131890613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
131890613
NCBI-ProteinID:
XP_059095991
LinkDB
All DBs
Position
11:complement(7830337..7832860)
Genome browser
AA seq
451 aa
AA seq
DB search
MREVISIHIGQAGVQMGNACWELYCLEHGIQPDGLMPSDDSIGVADDSFNTFFSETSGGK
HVPRAMFIDLEPSVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDVSME
KIRKLCDQCSGLQGFLVFHSFGGGTGSGFASLLMERLSLDFGKKSKLGFSIYPAPQISTA
IVEPYNALLYTHTTLEHCDVAFLVDNQAIYDICRINLELTRPTYTNLNRLIAQIISSITA
SLRFDGALNVDLNEFQTNLVPYPRIHYPLATYGPVISSSKAYHEKLSVDEITKNCFEPNS
QMVKCDPRKGKYMAVCLLYRGDVVPKDVNGAIAQMKVQKTVQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVHRAVCCLSNTTAIQEAWAHLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDIAALELDYQEVGSDALSDEEQSYADDG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagtcatttcaattcatattggccaagctggagtccaaatggggaatgcctgt
tgggaattatattgcctagaacatggtattcagccggatgggttgatgcctagcgatgat
tcgattggagtggccgatgattccttcaacacgtttttctccgaaacaagcggtggcaaa
cacgttcctcgggccatgtttattgatttagagccaagtgttgttgatgaggttcgtact
gggacctaccgccaactgtttcatccagagcaattgatcacagggaaggaagatgccgcc
aataattacgctcgtggtcactataccattggaaaggaattaattgacgtttcgatggaa
aagattcgtaagctctgtgatcagtgctcaggtctacaaggatttttggtatttcattct
ttcggaggaggcacaggttcaggatttgcgtccctattgatggaaaggttatcgctcgat
tttggaaagaagtcaaaattgggattctctatataccctgcacctcaaatatcaacagca
attgtggagccatacaacgcgcttctatatacgcatacaaccttggaacattgtgatgtg
gcctttttagttgacaaccaagccatctatgacatttgtaggatcaaccttgagctgaca
agaccaacatacaccaatctcaatcgactaatagcgcaaatcatttcatcaattactgct
tcgttgcgatttgatggtgctttaaacgttgacttaaatgaatttcaaactaatttggtt
ccatatccgcggatccattacccgttagccacgtatgggccagttatctcttcctctaag
gcataccatgagaaactctctgttgatgaaatcacaaagaattgcttcgaaccaaacagc
cagatggtaaaatgtgaccccaggaaaggaaagtatatggccgtgtgtcttctttatcgt
ggagatgttgtgccaaaagacgtcaatggagccatagcacaaatgaaagtgcaaaaaaca
gttcagtttgtcgattggtgcccaaccggtttcaaagttgggatcaattatcaaccccca
actgtggtccctggaggggatttggcaaaagtccatcgtgcagtgtgttgcttaagcaat
acaaccgcaattcaggaggcttgggcacacttggaccacaagtttgacctcatgtatgca
aagcgagcatttgtgcattggtatgttggggagggtatggaggaaggcgaattctctgaa
gctcgggaggacatcgctgctctggagctagactatcaagaggtgggaagtgatgctctt
tctgatgaagaacaatcttacgctgacgatggttga
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