Tigriopus californicus (tidepool copepod): 131890623
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Entry
131890623 CDS
T09700
Name
(RefSeq) transcriptional repressor protein YY1-like
KO
K09201
transcription factor YY
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03082
ATP-dependent chromatin remodeling
tcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131890623
03083 Polycomb repressive complex
131890623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131890623
03036 Chromosome and associated proteins [BR:
tcf03036
]
131890623
03029 Mitochondrial biogenesis [BR:
tcf03029
]
131890623
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131890623
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
131890623
Mitochondrial biogenesis [BR:
tcf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
131890623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Raffinose_syn
IBR
Motif
Other DBs
NCBI-GeneID:
131890623
NCBI-ProteinID:
XP_059096001
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All DBs
Position
11:9633314..9636049
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AA seq
548 aa
AA seq
DB search
MASSEVSEVTEVFSVFPDDDLTPVLDDEDAISGMLNGTHHHHHHHHHHHHHHSSNHHGST
DPDAPSSVIYGGGHDMIIGGTESADLPSTVDEDHEEEEDEDDEEEEEEDVDDIDLGPVSA
FGGGPHLHSQPHHLPPDVDSDDPDENEHSLDALPPVQLQSPSIIARNNHRRVGPVQPAPP
NEFSLSSRVTSSSSVSPASSLVNRSGVNGKKRLPVTLVRGSPRVSQTGGGFTHLTSGAPD
GRSPSANRLNSSKNHHRADNHGGDISIGWQQKQVSIKTLEGEFSVTMWASGVDEDDDKKD
DSNSGGGVDVSSSGVLDDLNSNDEADPDYTEYMTGKKLPPGGIPGLDLSDPKQLAEFARI
KPKRQSGDDVPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKR
HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKS
HILTHAKQKSLHHRQDSLGNGSDVRISPIAFHYTTKGSGLPNIGDEEDQDEEQILQQQQP
PPFVVYTQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtccgaggtgagcgaggtcaccgaggtcttcagtgtctttcccgatgacgat
ttaaccccggtgttggatgatgaagatgccattagcgggatgctcaatggcacccaccat
catcatcatcatcatcatcaccatcatcaccaccactcttcgaatcatcatggatccacg
gatccggatgcgccctcatccgtgatttacggaggggggcacgacatgatcatcggtggg
accgagtcggccgatcttccttcaaccgtggatgaggaccatgaggaggaggaagacgag
gacgatgaagaagaggaggaagaggacgtggatgatattgaccttgggcccgtttccgcc
tttggcggcgggccccatcttcattctcagccccaccatctcccgcccgatgtggattcg
gacgatccggatgagaacgaacattctttggatgctttgcccccggttcaacttcagtca
ccctccattatcgcccggaacaatcaccgacgagtgggccccgttcagcccgccccgccc
aacgagttcagtttgagctcacgggtcacgtcatcctcgtcggtctcgcccgcctcgtct
ttggtcaatcgatccggagtaaacgggaagaaacgcctgcccgtaaccttggttcgggga
tccccgcgtgttagtcaaaccggaggtggattcactcatctcacgagtggggcgcccgat
gggcgtagtccgagtgccaaccgcttgaattcgtccaagaatcaccaccgtgctgacaat
cacgggggtgatatctcgattggatggcaacaaaagcaagtgtcgatcaaaacgctggaa
ggcgaattctctgtcaccatgtgggcctccggcgttgatgaagatgacgacaaaaaagac
gactcgaatagtggcggaggcgtcgatgtcagcagttcgggggtgctagatgatcttaac
tcgaatgatgaagcagatcccgactacaccgagtacatgacaggcaaaaagttgcccccg
ggaggaatccccggcctcgatctctccgatcccaaacaattggcagagtttgctaggata
aagccgaagcgacaatcgggcgatgatgttcctcgcactatagcctgccctcacaaggga
tgtacaaagatgtttcgtgacaactctgccatgcggaaacatctccatacccacggtcct
cgtgtccacgtttgtgccgagtgtgggaaggcctttgtcgagagctcgaaactgaaacgc
caccaactcgtccacacgggagagaaaccctttcaatgcacattcgaaggctgtgggaaa
cgattctctctggactttaaccttcgtacccatgtccgaatacatacgggtgaccggcct
tacgtctgtccattcgatggatgcaataagaaatttgcccagtccactaatctcaaatct
cacattctcacccatgccaaacaaaagagtcttcatcatcgtcaagacagccttggaaat
ggaagtgacgtcaggatatcgccgatagctttccattataccaccaaaggctcaggtctg
cccaatattggcgatgaggaagatcaagacgaagagcaaatacttcaacaacaacaacca
ccaccatttgtagtctacacacagtga
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