Tigriopus californicus (tidepool copepod): 131890631
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Entry
131890631 CDS
T09700
Name
(RefSeq) mRNA export factor Gle1-like
KO
K18723
nucleoporin GLE1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03013
Nucleocytoplasmic transport
tcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131890631
03015 mRNA surveillance pathway
131890631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131890631
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131890631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
131890631
NCBI-ProteinID:
XP_059096011
LinkDB
All DBs
Position
11:1654743..1657301
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AA seq
739 aa
AA seq
DB search
MNNTGDARARVVLSLRATPKGALHYDRGAPAVPAASPEWHASPSDWTCVLEEVTSEMDRA
KAQSLARLTRDWQRVLSLSGRSDELEVTLGPWPPTTPTPGPRSDPPSVQDEVQKSTPPAP
VAARRKSSPRLSPVPRTGSPLYGWTSPVDQQLRQAERARQVDRDRVVMAHRQRVAQVQVA
FDQASRHQYQAQSETRMADLARKTQERLRVEAEAEAERAAETRRLAVARQEAEDKRRRQV
QAQMEAAEADEKVAQAEKAEKAEKAQAAFQAFRSECQKWVELILKAEKALQAAAAPVQAQ
SPALAPFLAQRKQDLPQLKQFLQTGTLPSPATLSQARDSHAQLERLLRDLSVASQQFQKE
QAEAQAEAQAEAARPPALVPKTPPPPTVSAPPPVPVVVSIEPQSRPTPTAPATPSSATSQ
LAREISASNRAKFDALVTFKANWLDHLRAFMSDPAHKSFRFSCQKAVNTPVNALNANSSS
HLRQKLDHLQALLRGQGLEVTGQAFNASIHPMGIPFCKYILAKKLVDQGSDVISAKPDAA
FGVAQVIVSLWAEFGDFGQLILATAYEVCPYLVPYHKQKPPQQDSTAYYQSLGYQLTNEG
SLEKQDLYVKRMAGIARLYAAVTITALPKDQLGQADHPHGVGYAWCWLSSELNLNPVNDV
TATLIQVILEVSGHKLAEMFGKMFLKLVVTLSRRYLPLIKKATIEGSGGPVERLETTLSK
IMSTGQVEPPPGLLSLGFI
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaataacacgggtgatgcccgggctcgcgtggtgttgagtctgcgagccacgcccaaa
ggcgccttacattatgaccggggcgcaccggccgtaccagcggcttcgcccgaatggcac
gcctcgcccagcgattggacgtgcgtgctcgaagaagtcacttccgaaatggatcgcgcc
aaggcccaaagcttggcccgtttgacgcgggattggcagcgcgtcctcagcttgagcggt
cgatccgatgagctggaggtcaccttgggaccctggcccccgaccacgcctacccctggc
ccacggtctgacccgccgtccgtccaggatgaagttcaaaagtccactccacctgctccg
gtcgccgcgcgaagaaagtccagtccccggttatccccggtgcctcggacgggttcaccg
ctctacggctggacctcgcccgtggaccaacagctgcgccaagccgaacgggctcgtcag
gtcgaccgggatcgggtggtcatggcccatcgccaacgggtggcgcaagttcaagtggct
ttcgatcaagccagtcgccatcagtatcaggctcagagtgagacgcgaatggcggatttg
gcgcgaaagacccaagagcgcttgagggtggaggccgaggccgaggctgaacgagccgcc
gagactcgacggttggctgtggcgcggcaggaggccgaggacaagcggcggcgacaagtt
caggctcagatggaagccgccgaggcagatgaaaaggtggcccaggctgaaaaggccgag
aaggccgaaaaggcccaagccgctttccaggctttccggagtgagtgtcagaagtgggtc
gagttaatactgaaggctgagaaggcgttgcaagcggcggccgctccggtccaggctcaa
tcaccggccttggcaccctttctggcccaacgcaagcaggatttgccgcaattgaagcag
ttcttgcaaactgggaccttgccttcgcccgccacattatcgcaggcccgtgacagccac
gcccaactggaaaggttgcttcgagatttgtccgtggcctcgcagcaattccaaaaggaa
caagctgaggcccaagctgaggcccaagctgaggccgctcggccgcccgccctcgtcccg
aaaacgccacctccaccgactgtgagtgccccgcctcccgttccggtggtcgtttccatc
gaaccccaatctcgtccaactcccacggctccagccacgccctcatccgccacatcacaa
ttggctagggaaatctcggcctcgaatcgggccaaatttgacgctttggtgaccttcaag
gccaattggttggaccatctgcgtgctttcatgtccgaccctgctcataaatccttccgt
ttctcatgtcaaaaggctgtgaacacgccggttaatgccctcaatgccaattcctcgtct
catctccgacagaagctcgaccatctccaagcccttctccgaggtcaaggccttgaggtg
accgggcaagcttttaatgcctcgatccatcccatgggcatcccattctgcaaatacatc
ctagccaagaaactcgtggatcaaggctcggacgtgatcagcgccaagccggatgcggcc
tttggcgtggctcaagtgatcgtgtctctgtgggcggaatttggggatttcggccaattg
atcctggccaccgcctacgaggtgtgtccctatctggtcccataccacaaacagaagcct
ccccagcaggattccacggcttactaccaatctctgggataccagctcaccaacgaaggc
tcattggagaagcaagacttgtatgtgaaacgcatggcgggtattgcccgattgtacgcc
gcagtcaccatcacggctctgcccaaagatcagttgggccaagccgatcacccgcatggc
gttggatacgcttggtgttggctgtcgtcggaattgaatcttaacccggtcaacgatgtg
acggccacgctcattcaagtgatcctggaggtgagcggtcacaagttggccgagatgttc
ggcaaaatgttcctcaaattggtggtcaccttgagtcgccgatatttgccgctcatcaaa
aaggccaccatcgaaggctcagggggtcctgtggagcgtttggagaccactctcagtaaa
atcatgtccacgggtcaggtggagccaccaccgggcctactcagtcttggattcatatag
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