Tigriopus californicus (tidepool copepod): 131890632
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Entry
131890632 CDS
T09700
Name
(RefSeq) leucine-rich repeat protein 1-like
KO
K10348
LRR-repeat protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131890632
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
131890632
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_14
LRR_1
LRR_LRWD1
LRR_5
Motif
Other DBs
NCBI-GeneID:
131890632
NCBI-ProteinID:
XP_059096012
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All DBs
Position
11:1657307..1658714
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AA seq
417 aa
AA seq
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MRISADVLVSNRALCTHNIKGKVKPVRSSISIGKKSVTGSAKESEIFILVCTAQNRGGTK
YEVRKNVQGVFTKFAHEGKATIRLIEPQLDICIQKADVVPLKAFLNVLGKVMAGRDVSQL
SLSAMNPASAAQVTKPVTVLNIKDKRDYPMTSNFPSSLEILKAPDLNLNKIDSRIFKLKH
LTTLDLASNSIKEIPPQIRDLKLRSIILSENRLTELPVAMFTFGSNLVGSLVNLSLAKNG
IKRLPEQICYCSQLHSLNMNDNQLTRLPIRLGTVQSLQVLKAANNQLKYLPGTMLYKQLD
SLDIAGNSFETFNRLPQILVLRKRGDSLIDHCLRTIDRSEIDIENEILPKTLIDTWRSRV
KCACGKWCFIRRLAVHVCLRVSKIAQTISVPNDVISFELILCSQDCITKFTSNLFSL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcagcgccgatgttctggtgtccaatcgggctctgtgcacgcacaacattaaa
ggcaaagtcaaacctgtccgcagctctatttcaatcgggaaaaaatccgtgactggttca
gccaaagagtctgagatcttcatcctggtgtgcacggctcaaaatcgaggcgggaccaaa
tacgaagtgagaaagaacgtgcaaggtgtgttcacgaaatttgctcacgaaggcaaggcc
accattcgtctgattgagcctcagttggatatttgcatccaaaaggccgatgtcgttcct
ctcaaggcctttctgaacgttctgggcaaggtgatggcgggtcgagatgtttctcagctg
agtctgtccgccatgaatccggctagtgcggcccaggtgaccaaacccgtgacagtgttg
aatatcaaggacaaaagagactacccaatgacttccaacttcccgtcctcgctcgagatc
ctcaaagcgcctgatttgaacctcaacaagattgattcgcggatattcaaactcaagcat
ttgaccaccctagatttggcgtctaactcaatcaaggagatcccgcctcaaatccgtgat
ctcaaactccgatccattatcttgtccgaaaaccgactcacggagcttcccgtggcaatg
ttcacgtttggatcgaatttggtcggttccttagttaatttatccttggccaaaaacggc
atcaagcgcttgccggaacagatctgttattgctctcagttgcattcgttgaacatgaac
gacaaccaattgacccgattaccgatccggttgggaaccgttcagtctcttcaagtgctg
aaagcggccaacaaccaactcaaatacctccctggaaccatgctctataaacaattggac
tctctggacatcgctgggaacagttttgagaccttcaatcgactcccacagatcttggtg
ctccggaaacgaggagattcgctcatcgaccattgcctccgaacgatcgatcggtccgaa
attgacatcgaaaacgaaatccttcccaaaacactcattgacacttggcgaagtcgggtc
aagtgtgcgtgcggaaaatggtgtttcattcgacgattggccgtccacgtgtgtttgcgt
gtgtccaaaatcgctcaaaccatctccgtacccaatgatgtgatctcatttgaactaatc
ttgtgctcgcaagactgcattaccaagttcacctccaacttattctcactctaa
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