Tigriopus californicus (tidepool copepod): 131890895
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Entry
131890895 CDS
T09700
Name
(RefSeq) protein trachealess-like isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131890895
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
131890895
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
bHLH_HIF1A
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
131890895
NCBI-ProteinID:
XP_059096323
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Position
11:complement(8836145..8852000)
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AA seq
575 aa
AA seq
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MQGREETHTSSYSPPASMDLHMPQSFSYYSCIMENNAVFSGQPMAYTKVYGSLENCGRQL
HDDLHTNGSLNSRILELRKEKSRDAARSRRGKENFEFYELAKMLPLPSAITSQLDKASII
RLTIAFLRLREFAANGAEKWTKDNNNRIKSKIGRKHLSNLVVDVYQEHEGTHILQSLDGF
AISLNADGRFLYISETVSIYLGLSQVELTGSSVFDYVHQSDHNELAEQLGVTLAGNRQDM
NEDTKSFGSCPSIPDVCYPVTSLMYVNKQNMNAPNASYDRAFCIRMKSTLTKRGCHFKSS
GYRVVLVLGKLRPVGNNENKKSSLMRDGTPSISGFIGLAIALPPPSVHEVRLESDMFVTR
LTFDFRIAHCEPKISELLDYSCDDVVGLSLYALCHGEDVHKIRKMHEDLLNKGQVMSNYF
RLINKYGGYTWMQSCATLICNTKNSEEQSIVCVNYVLSGPQYSNFVMDTCQIPTEAKCKP
DHSNLSKKSTSPTVFQPKSDETCDRRDGHTLCLDNNKNLARSNSEDESQHHQSQQQQQQP
QQQQQQQQQQTESPDDIRRSGNRSDWPFWRPPTLM
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtagagaggaaacacacacgtcctcttacagtccaccagcttcaatggattta
catatgcctcagtcgttttcatactacagttgcatcatggaaaacaacgccgtgttctcg
ggacagcccatggcttacaccaaagtatatggaagtctggaaaactgtggcagacaactc
cacgacgatcttcacacgaacgggtctctgaactcgagaattctggagttacggaaagaa
aaatctcgcgatgccgccagatcgcgccgcggaaaagagaattttgagttctatgaacta
gccaaaatgttgccattgccgtctgccatcacttcccaactggacaaagcctccattatc
cggctcaccattgcttttttgcgattgcgggagtttgcggccaacggggctgaaaaatgg
accaaggacaacaacaaccgaatcaagtccaaaattggtcggaaacatttgtcaaatctc
gttgtggatgtgtaccaagaacatgaggggacacatatcctccaatcactcgatggattc
gccatctctctcaacgccgatgggaggtttctttacatctcagagactgtttccatttat
ctcggtttatcccaggtggaattgacggggagcagcgtctttgattacgttcaccaatcg
gatcataatgaattagcggaacaacttggtgtgactttggccggaaatcgacaagacatg
aatgaggacacaaagtcattcggctcttgtcccagtattcctgatgtttgctacccggtg
acatcactcatgtatgtaaacaaacagaacatgaacgcccctaatgcctcgtacgatcgc
gcattttgcatccgcatgaagtccaccctcaccaaaagaggttgtcactttaagtcttcg
ggatatagggttgttctagtgttgggcaagctccgccctgtgggtaacaatgagaacaag
aagagctctctaatgcgggatggcacgccttccatatccggtttcattgggctggccatc
gctcttccccctccgagtgtacatgaagtccgtttggaaagcgacatgtttgtcactcgc
ctcacatttgacttcagaatcgcgcattgtgaaccaaagatctctgagctcttagactac
tcctgtgatgatgtggttggcttgtcattgtatgctctttgtcatggtgaagatgtgcac
aagattcgaaaaatgcacgaggatttgctcaacaaaggccaagtgatgagcaattatttt
cgacttataaacaaatatggcggatacacgtggatgcaaagctgcgctactttgatttgc
aacacgaaaaactccgaggagcagagcattgtgtgtgtcaattatgtcttaagcggccca
cagtatagcaactttgttatggatacttgtcaaatacccaccgaagccaaatgtaagcca
gaccattctaacctatcaaaaaagtctacatccccgacagtatttcaacctaagtctgat
gaaacatgtgatcggagagatggtcatactctctgtctagataataacaaaaatcttgct
cggagcaattcagaagacgagtcacaacatcatcagtcacaacaacaacaacaacagccg
cagcaacaacaacaacaacaacagcagcaaaccgagtctcccgatgacataaggcgatca
ggaaaccgaagtgattggccattttggagacctccgaccctaatgtaa
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