Tigriopus californicus (tidepool copepod): 131890980
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Entry
131890980 CDS
T09700
Name
(RefSeq) DAZ-associated protein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131890980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131890980
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131890980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
131890980
NCBI-ProteinID:
XP_059096426
LinkDB
All DBs
Position
11:15064387..15068927
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AA seq
498 aa
AA seq
DB search
MTHSPHMGGHGLPNGPPPPRIQGKKHRHNDDEQGKLFVGGLSWDTTQDTLLSYFGRFGEV
IDCVVMKNTETGRSRGFGFVTFADPTNIDAVLASVPHSLDGRTIDPKACNPRSMQKPKKS
NVAQYYPKVFLGGLPPNITETEIQSFFMRYGNVIEVVIMYDQEKKKSRGFGFLSFADEAA
CSKAVADHYVMIQNKQVEVKRAEPRTNQGGHDDMDGGGHKMPAMDQWGMAQPISPTPNGH
GPGGIQPPNYAGWGPPPVGAPHPAPPSTAYPAQYASPHPSQHRPQHPQAHQPPHPPQWGG
PKPQPPPQQPGAPPPHWGAAPAQYGQPPAVSAPASHVPHHPHYQPRGPPAAVGPPPTPPQ
TVTTYWPGPPTANARPPPMGPPHLHPDPYGHNPPSAVPEYHPAPFQSRPQTQPNAVGPPP
SAYPTAYQYALKPAHPSAQAPPPGPGYPSSTVHEFYPHAPSPSGSYTQPDLSGSLGPQRG
GAIYAAQPSPYHPYRRNV
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgactcacagtcctcatatgggtgggcacggtctgcccaatggaccgcctcctcccagg
atccaagggaaaaagcaccgacacaacgacgatgagcagggcaaactctttgtcggtgga
ctcagctgggataccactcaagacacgctcttgtcctactttgggcgttttggcgaggtc
attgattgcgtggtcatgaagaacacggagacgggacgctcccgcggctttggatttgtg
acctttgcggatcccaccaatattgacgccgttctggccagtgtgccgcattcgctggac
ggtcgcaccattgaccccaaggcttgcaatccgcggagtatgcagaaaccaaagaagtcc
aatgtggctcaatactaccccaaggtgtttttgggcgggttaccccccaacatcacggag
accgagatccaaagtttcttcatgcgttatgggaatgtgatcgaagtggtgattatgtac
gaccaagagaagaagaagagccgcgggttcgggttcttgagctttgccgacgaagccgct
tgcagcaaagccgtggccgaccactacgtcatgatccagaacaagcaggtcgaggtcaaa
cgagccgagccacggaccaaccaagggggtcacgacgacatggatggaggcgggcacaaa
atgccggccatggatcaatggggcatggcccagcccattagtcccacacccaatggccat
gggccagggggtattcagcctcccaattatgctgggtgggggccgccgcccgtgggtgca
ccccatccggcccccccttcgacggcctaccccgctcaatatgctagcccgcatccaagt
cagcatcgacctcagcacccccaggctcatcaaccgcctcatcccccacaatggggtggt
cccaagccccaaccgccaccccaacagcccggcgcgcccccgcctcattggggagcggct
ccggcccaatatgggcagccacccgccgtctcggcgcccgcctcacacgtgccacatcac
ccccactaccagcctcggggtccgccggcggcggtgggtccgccccccactcccccgcaa
accgtgaccacctactggccgggaccacccacggccaatgcccggccaccccccatggga
ccgcctcacctacatccggatccgtacggtcacaatccgccgtcggccgtgcctgagtat
catcccgccccgtttcaatctcgacctcagactcagcccaacgccgtggggcccccgccc
tccgcctacccaacggcttatcaatacgccctcaagcccgcccaccccagtgctcaagca
ccgccgcccggtccgggctacccgagctccacggtgcacgagttttacccgcatgcaccc
agcccgagtgggtcgtacacgcagccggatttgagcggtagtctggggccgcaacgaggc
ggggccatttacgcggcccaaccctcgccgtaccatccgtatcggcgaaacgtttga
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integrated database retrieval system
