Tigriopus californicus (tidepool copepod): 131891006
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Entry
131891006 CDS
T09700
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131891006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131891006
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131891006
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
131891006
NCBI-ProteinID:
XP_059096469
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All DBs
Position
2:complement(10309435..10311525)
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AA seq
614 aa
AA seq
DB search
MPEATDHVPDVKRVFKPRRLPSQNIVDRFMSREHYGIHFRRNALDTNRGFYTNVYPNYTI
SNVEKPNCFLRKFTPDGKRFIAFSQNQTHLEIYLYKGPSAMNEAVCELWDSDFLLPMFCQ
DPAQAPNIRRVAFERFFTLEHLVLLTPLGQEQLNRECSLFSDDGEYVIVGSACFLSDEQH
PPMWRTHQNNESVAPNPRHALEDYTLHSIEISEGFLVDRVSFKADKIYLSHNQGLYLYKD
TLTVLSVQHQTIHVFKFVMGKFVPVRKIGRLIYEDDDYLLSHTLTSDQQTSLPGNFTYRP
YREQTINLLKHRILAHLYRRAVALSHLDKSPYELRKFYMYFDQIKALRMWKIQLLDEDHV
LIKYSSEEVVTLRSGEPNSHAAFFVVYNMTTTEVLSMYQNNSPELVDICENFTDFFRNSN
LNLVHGEFRYAQHTSSPSNNIYAQLVHQRFKQTIISAKNGGINEARKRVLAQLPISAQSY
SSSPYLDLSLFSYDEKWISLMERPKACSELPIHFFGRESGITKFRIYPGPLERPNTNSSA
RKLVAFIFHPTDPFAISVQKTNYEYVVNFHVRKAPFSSKKSSTQRSGLDQVNLPDYFRSR
QQAGQANSSDPASL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagccacggatcatgtcccggatgtgaaacgggtcttcaaaccccgtcgactt
ccctcccaaaatatcgtggatcggtttatgtcccgtgaacattatgggatccatttccga
cgcaatgcgttggatacaaaccgagggttctacaccaatgtttacccgaactacaccatc
tcaaatgtggagaaacccaattgcttcttgcggaaatttacgcccgatggcaagcgattc
attgccttctcgcagaatcagacccatctcgagatctacttgtacaaaggaccttcggcc
atgaacgaggctgtgtgtgagttgtgggactcagatttcctgctgcccatgttctgtcaa
gatccggctcaagcacccaatattcgaagagtggcctttgagcggttcttcaccctggag
catctagtgcttttaacgcccttgggtcaagagcagctcaatcgggaatgctccttgttc
tccgatgatggcgaatatgtgatagtgggttcggcttgctttctgtccgatgagcagcat
ccacccatgtggcgaactcatcagaataacgaatccgtggcgcccaatcctcgacacgcc
ttggaggattataccctccatagtatcgaaatctcggaaggtttcctggtggatcgggtc
tcattcaaggccgataagatctatttgtcgcacaatcagggcctctatttgtataaggac
acgttaactgtgctctccgtgcaacaccagacgattcatgtgttcaagttcgtgatgggc
aagttcgttccggtccgaaagatcggtcgattgatctacgaagacgacgactacttgctc
tcacacacgctgacttcggatcaacaaacgtctctgcccggaaatttcacctatcgtccc
taccgggaacagaccatcaatctgctcaagcatcgaattctagcccatctatatcgcaga
gccgtggcgttatcccatctggacaaatctccgtacgagttgaggaagttctacatgtac
ttcgatcagatcaaggctctacgcatgtggaagatccaactcttggatgaggatcacgtg
ctcataaagtactcgagcgaagaggtggtgactctacgcagcggggagcccaactcacac
gcagccttcttcgtggtctacaacatgaccaccaccgaagtgttgtccatgtatcagaac
aactctcctgaactggtagacatttgcgagaacttcaccgacttctttcggaactccaac
ctgaatctggtccacggcgagttccggtatgctcaacacacgtctagtccgtcgaacaat
atctacgcccaactagtccaccaacggttcaaacagactattatctcggccaagaacggc
gggatcaacgaggctcggaaacgggttttagcgcaattgcccataagcgctcaatcctat
tccagttcgccttacctcgacttgtctttattcagctatgacgagaaatggatctcgctc
atggaacgccccaaggcgtgcagtgaactacccattcatttcttcggtcgtgagagtggg
atcaccaagttccggatttatccaggaccgctggaacggccgaatacaaacagctcggcc
cgaaaattggtggcctttatcttccatcccaccgatccatttgccatttcggtccaaaag
accaactacgaatatgtggtcaactttcatgtgagaaaagcgcctttttcgagcaagaag
tcgtccacccagcgatcagggttggatcaagtcaatctcccggattactttcgaagtcgt
caacaagcgggtcaagccaattcctccgaccctgcctcactttga
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