Tigriopus californicus (tidepool copepod): 131891019
Help
Entry
131891019 CDS
T09700
Name
(RefSeq) syntaxin-18-like
KO
K08492
syntaxin 18
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04130
SNARE interactions in vesicular transport
tcf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
131891019
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
131891019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131891019
Membrane trafficking [BR:
tcf04131
]
SNARE
Syntaxin (Qa)
Stx-rER
131891019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
DUF6548
BLOC1_2
ARM_TT21_5th
HisK-N-like
Motif
Other DBs
NCBI-GeneID:
131891019
NCBI-ProteinID:
XP_059096481
LinkDB
All DBs
Position
11:6533836..6536414
Genome browser
AA seq
379 aa
AA seq
DB search
MRLNVRARDLTGQFREAVARIDRADPLWAVAASTVSSTGPLVKNKHRILPRRSPNPASNP
PGECGLEALARQILVHITRLQQFLWDHRSDYVDVVRAAWTRGPGLTDRQKDHIDAGANRF
IHTCQSLIARFQSELNQAQDQLNAGRRDHLTGVVQILERYLKDVCQIYAQQRAIRVQREL
EFQKLSRLEIKARKSSQSTGESERHLESDLIDRLGTSDVETESEIEDMDSDHSDRESGGA
TPPKRRKSDTRLPVPPPSTEFYEETGEDEPLSPEDIQLLERENTKLYERFMENQDNVQQI
ENKVVRIAELQEVFADKVLQQKDDIELVHHHAVTTTENVKDANEELRKAIQNQASIRVYI
LFFLLVMSFSLLFLDWYNE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcaacgtgcgggctcgcgatttgacgggtcaattccgggaggccgtggcgcga
atcgatcgcgccgatccgctgtgggccgtggcggcgtccacggtctcgagcaccggaccg
ctcgtcaagaataagcaccgcatcctcccgcgtcgctcgcccaatcccgcttcgaacccg
ccgggcgagtgcggtttggaggccttggcccgtcagatcctggttcacatcacgcgattg
cagcagttcttgtgggatcatcgctcggattacgtggacgtggtgcgggcagcttggacc
cgtggacccggactcaccgatcgacagaaggatcatattgacgcgggagccaatcggttt
attcacacttgccaaagtctgatcgcccgcttccagagcgaactcaatcaagcccaagat
caattgaatgcggggcgacgtgatcatttgaccggcgtagtccagatcctggagcgatat
ctcaaggatgtgtgtcagatatacgcccagcaacgggccattcgcgtccaacgagagctc
gagttccagaagctctcgcgattggagatcaaggcacgcaaaagcagccaatcgaccgga
gagtctgaacgtcatctcgagtccgatttgatcgatcgactcggaacatccgatgtcgag
actgagagcgaaattgaggacatggattcagatcattcggaccgtgaaagtggaggggcc
actccgcccaaacgacgtaaatctgatacacgtctacccgtgcctccaccctcaaccgaa
ttctacgaagaaacaggcgaggatgagcctctctccccggaagacatccaacttctagag
cgcgagaacacgaagctctatgaaaggtttatggaaaatcaggataatgtccaacagatc
gagaacaaggtggtgagaattgccgagttgcaagaagtatttgccgacaaagtgcttcaa
cagaaggacgatatcgaactcgtgcatcaccatgcggtgactacgaccgaaaacgttaaa
gacgcgaacgaggagcttcggaaggctattcaaaaccaagcctcgattcgggtgtacatt
ctcttctttttgttggtgatgtcgttctcgcttctatttctagattggtacaacgaataa
DBGET
integrated database retrieval system
