Tigriopus californicus (tidepool copepod): 131891146
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Entry
131891146 CDS
T09700
Name
(RefSeq) cytoplasmic 60S subunit biogenesis factor ZNF622-like
KO
K14816
pre-60S factor REI1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131891146
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
131891146
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_jaz
zf-met
Zf-C2H2_ZNF451_2nd
zf-DBF
RNA_pol_3_Rpc31
Cwf_Cwc_15
C2H2-zf_KIN17
DUF3108
NOA36
Motif
Other DBs
NCBI-GeneID:
131891146
NCBI-ProteinID:
XP_059096652
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Position
11:complement(3329058..3331017)
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AA seq
406 aa
AA seq
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MFRNQMVNLEGKQHTCVTCRVAFDTPETQRDHYKTDWHRYNLKRKVAELAPITLHDFQGK
MKQHEQEMRVLSGKVKAPTGYCVCCRKSFTTAKAYENHLNSKKHKDTEIQFEKRENRLEI
QNNRLNRTPSESKNDDPIEDEEDHDDDDDDDDDDDDEDIEEVDSDEWEEDTFVGGESIPE
QVCLFCPNQSKDMEKNLIHMGEAHSFFIPDLDYVIDLEGLVAYLGAKVGQGFLCLWCNTR
SKHFQYLAAVQKHMRDKGHCKLLNEGNALVEYAKFFDYSTSYPEDLMAPHGATPMDQDGA
EHEVDLNALDDSGYELTLPSGATIGHRSLMRYYKQSLNPDRQVAVRKPANHLLSHYKALG
YTGLSASQAKVKAKDIKFMNHIQQKHRMQLGVKANKLQKHWVDPTL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcaaccaaatggtgaatctggaaggcaagcaacacacctgcgtcacttgccgg
gtggcctttgacacgcctgagacccaaagagaccactacaagaccgattggcatcgatac
aatctgaagcggaaagtggccgaattggcgcccatcacgctccatgacttccaaggcaag
atgaaacaacacgaacaggaaatgagggtcctctccgggaaggtaaaggctcccacggga
tattgtgtctgctgtcggaaaagcttcaccactgccaaggcctatgagaaccatttgaac
tcgaagaagcacaaagacacggagattcagtttgaaaagcgcgagaatcgcttggagatc
cagaacaatcggctcaacagaactccttcagaatcgaagaacgacgaccctatcgaagat
gaggaggaccatgacgacgacgacgatgatgatgatgatgatgatgatgaagacattgag
gaggtggattcggacgagtgggaagaggacaccttcgtgggtggcgagtccattcccgaa
caagtctgtctgttctgtcccaatcaatccaaagacatggagaagaatctgattcacatg
ggcgaagcgcattccttcttcatcccggatctggattatgtgatcgatctcgagggactc
gtcgcctatttaggggccaaggtgggtcaagggttcctgtgtctatggtgcaacacccgg
agtaagcacttccaatatctggcggccgtgcagaagcacatgcgagacaaaggccattgc
aagctcttaaatgaaggcaacgctctggtggagtacgccaagttctttgattattccaca
agttatccggaggatctgatggctccccatggtgccacgcctatggaccaagatggggct
gagcatgaggtcgacctgaacgccttggacgactccggatacgaactcaccctcccttca
ggagccacgattggccaccgatccctcatgcgctactacaaacaaagtctgaatccggat
cgtcaagtagccgttcggaagccggccaatcatttattgagccactacaaggccctaggc
tacaccggtttgtcggccagccaagccaaggtcaaggccaaggatatcaagttcatgaac
cacatccaacagaagcatcgtatgcagttgggcgtcaaggccaacaaacttcaaaagcat
tgggtcgaccccaccctctaa
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