Tigriopus californicus (tidepool copepod): 131891150
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Entry
131891150 CDS
T09700
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase A-like
KO
K03767
peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:
5.2.1.8
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131891150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tcf03110
]
131891150
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131891150
Enzymes [BR:
tcf01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
131891150
Chaperones and folding catalysts [BR:
tcf03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
131891150
Exosome [BR:
tcf04147
]
Exosomal proteins
Proteins found in most exosomes
131891150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
DUF4834
FAM176
Ureide_permease
Piezo_TM1-24
SARAF
Ctr
CBP_BcsG
UPF0239
PFF1_TM
Rrn6_HB
SLC52_ribofla_tr
VPS13_N
Motif
Other DBs
NCBI-GeneID:
131891150
NCBI-ProteinID:
XP_059096657
LinkDB
All DBs
Position
11:3353393..3356905
Genome browser
AA seq
308 aa
AA seq
DB search
MFLIRTGGKGGICFQITVILVALVSLTHSQQYYDDSNQQYQQQQQQQQQQQQYQPHQNGQ
QQRQQPQDPYQQQEQYYEQEQPQDPYARQDGFHAQPHQPLDDEPSIRGFGQFLYDKINDG
FTNVKKLVQPVLGFGNRRADINDRTKVFFDVEINGQYLGRINMELFDEVVPKTTENFRQL
VTGVNGYGYKGSKFHRVIPGFMIQGGDFTAGDGTGGYSIYGPSFEDENFLIKHGSPGLLS
MANAGEDTNGSQFFITTAKTDWLDDKHVVFGRVADKKSFEVVEEIEKHGSSPDGQTDAEL
VIANSGEY
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgatccgaaccggaggaaaaggcgggatttgctttcaaatcacggtgatcctg
gtcgcccttgtctcgctaactcattcgcaacagtattatgatgattctaaccaacaatac
caacaacagcagcagcaacaacaacagcaacagcaatatcaaccacaccagaatggtcag
cagcaacggcaacaacctcaggatccttaccaacagcaggagcaatactatgaacaagaa
caacctcaagatccttatgctcgccaggatggcttccatgctcaacctcatcagcctttg
gatgacgaacccagcataagaggtttcggtcaattcctctatgacaagatcaacgacggt
ttcaccaatgttaaaaagctggtccaaccggttttgggattcggaaaccggagagccgac
atcaatgatcgcaccaaggtcttctttgacgtggagatcaacggtcaatacttgggacgg
atcaacatggaattgttcgacgaagtcgtgcccaagaccacagaaaatttcagacaactg
gtcacaggtgtgaatggttatggttacaagggttccaagtttcatcgagtcattcccgga
ttcatgatccaaggtggggatttcactgctggagatggaactggcggatactcaatctac
ggacccagttttgaggacgagaacttcctcatcaagcacggatccccaggcttgttgtcg
atggctaatgctggtgaggacacgaacggatcccaattcttcatcacgacagccaagacc
gattggttggacgacaagcacgtggtctttggccgagtggccgacaagaagtcctttgaa
gtggtggaggagatcgagaagcacggctcaagtccggatggtcaaaccgacgccgaactc
gtgattgccaactcgggcgaatattag
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