Tigriopus californicus (tidepool copepod): 131891236
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Entry
131891236 CDS
T09700
Name
(RefSeq) sphingomyelin synthase-related protein 1-like isoform X1
KO
K22697
phosphatidylethanolamine phospholipase C [EC:
3.1.4.62
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
131891236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131891236
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.62 phosphatidylethanolamine phospholipase C
131891236
Membrane trafficking [BR:
tcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
131891236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP2_C
PAP2
Motif
Other DBs
NCBI-GeneID:
131891236
NCBI-ProteinID:
XP_059096742
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All DBs
Position
12:complement(2275213..2289414)
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AA seq
507 aa
AA seq
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MSLPEDHPYHPPLNPDFGAFWTYLPEDRHIRDQLRDVLEFYDLWNCSGPILANLSRQDVD
SLCPRISLGVKQHLILGLQRWKRDRKGAGPPLVNGSARDLAAIPGLGLSSNSDSSGESED
ELWKEARRHSTLNLTKSQSLDQVLATGNVPAAYQPSKGSRSSPTATPTQSSNPLNTCLSC
LIRTKHGYALNLPPDRLKTLMAFLYGLCVSWLSAFVMVIVHDRVPDMERYPPLPDILLDN
LPHIPWAFEMCENIGLMLLAVWAGVCLFHRHRFILMRRFFSISGTIFLLRCVTMLITSLS
VPGKHLDCSPRPYGDIWQKFYNAYLIWSGAGMTLQGVRTCGDYMFSGHTVSLTLLNFFIT
EYTSRRIYFLHTFTWICNVFGIFFILAAHEHYSIDVFIAFYISSRLFLYYHTLANNKGAT
RVGQRGWFYFPLFYFFEANVDGRVPNVFEWPLRIEDLKCLSLNIRSFLPDEAMFLKPKPN
PETASTKMTSDRVEIPRDSRKSNKKMY
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcccgaagatcatccctaccacccgcccttgaatccggactttggcgccttt
tggacctacttgcccgaggatcgacatattcgcgaccagctccgggatgtcctggaattc
tatgacctctggaattgctcggggccgattttggccaacttaagtcggcaggatgtagac
tcgttgtgtccgcgaatctccttgggcgtgaaacaacatcttattctaggccttcagcga
tggaaacgggaccggaaaggggcggggccgcccttggtcaacggttctgcacgcgatttg
gctgccattccgggtttgggattgagttcgaattcggattcgtcgggtgaatcggaggat
gagttatggaaagaggcccgtcgtcattctaccttgaacttgaccaagagtcagtccttg
gaccaagttttggccactggaaatgtacctgcggcgtatcaaccaagtaaagggtcccga
tcatcgcccacggccactcccacacaatcaagcaacccactgaacacttgcctgagttgc
ttgatacgaaccaagcatggctacgcccttaacttaccaccagaccgattgaaaacgctg
atggcctttctgtatgggctttgcgtttcctggttgtcggcctttgtaatggtcattgtt
cacgatcgcgttccggacatggagagatatcctcctttaccagatattcttttggataac
cttccccacattccttgggcctttgagatgtgcgagaatattggcctgatgctcctggca
gtctgggcaggggtctgccttttccataggcacagattcattttaatgcgacgatttttc
tcgatatcgggcacgatatttcttcttcgttgcgtgaccatgttgatcacgtcattgagt
gtgccgggaaaacatctggattgctcgccacgcccctatggggatatttggcaaaagttc
tataacgcttatttgatttggtcaggagccgggatgactttacagggtgtgcgcacatgt
ggggactacatgttcagtggtcacactgtctccctgacgttgttgaacttctttatcaca
gaatacacgtcccggaggatctatttcctacacactttcacttggatttgcaatgtcttt
ggcattttcttcatccttgccgcccatgagcactattccattgacgtcttcattgcgttt
tatatttcatcaagattgttcttgtactaccacaccttggccaataataagggagccacc
agagttggtcagagaggctggttctatttcccattgttctacttcttcgaggccaatgtg
gatggccgtgtgcccaatgtgtttgaatggcctctgcggatcgaagatctcaaatgtctg
agcctcaatatcagatcctttctgcctgatgaagccatgttcttgaagcccaaaccaaac
ccagaaacagccagcacaaaaatgacgtcggatcgagtggagataccaagggactcaaga
aagagcaataagaaaatgtattaa
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