Tigriopus californicus (tidepool copepod): 131891259
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Entry
131891259 CDS
T09700
Name
(RefSeq) double-strand-break repair protein rad21 homolog
KO
K06670
cohesin complex subunit SCC1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcf03036
]
131891259
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
131891259
BRITE hierarchy
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
131891259
NCBI-ProteinID:
XP_059096774
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All DBs
Position
12:8406199..8409396
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AA seq
620 aa
AA seq
DB search
MFYAHFVLAKKGPLARIWLAAHWDKKLTKAHVFDTNIEKSVDGILQPKVKMALRTSGHLL
LGVVRIYSRKAKYLLADCNEAFVKIKMAFRPGMVDLPEEHREAAVNAITLPEMFHDFDTE
MPEMGEDEADLMGAQFSMNQTRAEEITMREDYGNINLDTADDSFGDLPNMHDRGQGGGGG
GGGGGGVEGRVTYVLCTXVDASAIRGIVRSKRKRKLVVDEVKAIAGEEMKAQLSDTGDIV
TTLDLAPPTKRLMHWKETGGVEKLFALPGRPLNCKDMFKAYQDHLTSSAAPNEFFDMLGD
SERENMQLEYVPGEDEELPPPRKPGRPPKRKKEDASAEEKTPTPKKSARASSRLQRHSRV
TPQAELEVPVPTPQPEPVASPAPASVAPATPGPAETEEDTPVPSVAPATPHPEPFQERAD
EMASLASQQTGFDQFPPNTPHPPAAETDSNPAATATATGPATAGANASGEFENMGYDQTN
PPMSNMGWDAEQQGAPTPGGAMSTGAPTPFHESEYDYNPASVGATKEDEMQENETIEEFE
DRVLNKRAAHLNTILKSRFEEQDHMKFADLPIRRLRKSMAQNFYSLLVLQKVMAIELQQE
VQFTGDIHIRKGPKFETVVL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgttttacgcccactttgtgctggccaaaaagggtcctttggcccggatttggttggcc
gcccattgggacaagaagctgaccaaggcccacgttttcgacacgaacatcgagaagtcg
gtggatggcatcctgcaacccaaggtcaagatggccttgcgcacctcgggtcatctcctg
ttgggcgtggtgcgcatctactcgcgcaaggccaagtacctgttggccgattgcaatgag
gcctttgtcaagatcaagatggcctttcgtccgggcatggtggacttgccggaggaacac
cgagaagcggccgtcaacgccatcactttgccggagatgttccacgattttgacacggaa
atgccggaaatgggcgaggatgaggcggatctgatgggcgcccaattctccatgaaccaa
acgcgggccgaggaaatcaccatgcgcgaagactacggcaacatcaacctcgacacggcc
gacgacagttttggcgatttgcccaatatgcatgacaggggacagggcgggggtggaggc
ggaggcggcgggggcggggtcgagggtcgtgttacgtacgtattatgtactnccgtggat
gcctcggccattcgcggcatcgtgcgatccaagcgcaaacgcaagttggtggtggacgag
gtcaaggccattgccggcgaggagatgaaggcgcagttgtcggacacgggcgacattgtg
accacgctggatctggccccgcccaccaaacgtctcatgcattggaaggaaacgggtggg
gtcgagaagctgttcgcgttgcccgggcgacccctgaattgtaaggacatgttcaaggcc
taccaggaccatctgaccagttcagccgcgcccaatgagttcttcgacatgttgggcgac
tctgagcgcgaaaacatgcagctggaatatgtacctggtgaagacgaggagctcccacct
cctcgcaagcccgggcgcccgcccaaacgcaagaaggaggacgccagcgccgaggagaag
acgcccacccccaagaagtcggctcgcgcctccagtcgcctgcagcgccactcccgtgtc
accccgcaggcggaactggaagtgcccgtgcccaccccgcaacccgaacccgtggcctca
cctgccccggcctccgtcgccccggccacacctggtccggccgaaactgaggaagacacg
cccgtgccctcggtggcgcccgccacccctcaccccgaaccctttcaagagcgggccgac
gaaatggcctccttggccagtcaacagaccggcttcgatcagttcccgcccaataccccc
catccaccggccgccgagacggactccaaccccgccgccaccgccaccgccaccggcccc
gccaccgccggtgccaatgccagcggcgaattcgaaaacatgggctacgaccagaccaat
ccgcccatgtccaacatgggctgggacgccgagcaacagggcgcgcccacaccgggcggg
gccatgtccacgggtgcgcctacaccgttccacgagtccgagtatgactacaatccggcc
tcggtgggcgccaccaaggaggacgagatgcaggagaacgagaccatcgaggagttcgag
gatcgcgtgctcaacaaacgcgccgctcacttgaacaccatcttgaaatcccgtttcgaa
gagcaagatcacatgaagtttgcggatctgcccattcgccgtctgcgcaaatccatggct
caaaacttttactcgttactggtgttgcaaaaggtcatggccatcgagctccagcaagag
gtccagttcacgggcgatattcacatacggaaagggcctaaattcgagaccgtagtctta
tag
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