Tigriopus californicus (tidepool copepod): 131891320
Help
Entry
131891320 CDS
T09700
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131891320
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
131891320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
Motif
Other DBs
NCBI-GeneID:
131891320
NCBI-ProteinID:
XP_059096831
LinkDB
All DBs
Position
2:complement(14201260..14203025)
Genome browser
AA seq
507 aa
AA seq
DB search
MLTPRFSLRQDDDCLYATIHAPFTNLSETEVFMADQDFRFFSKPYFLRLHLPHEVVEDDR
ATAKYEADSRSFIVTAPKKNHGQFFPGLDMLTSLLTPQGNESLRPTGGHHGAVSVGIEVL
DAPGEEEETDIDWYFDQQIPESEPKPASDCESSLLIRREEFRYGFAFTEHGVFERLLSEY
QELLDIKDPDHTNHMHRRALRIAKENEDFSEDHYLADLYDSDQIQYYLQAANPWQDLLQN
ESDLEDWSLTDVERDKLIALPKKEYLIEPDSLQSVYYGLIDILFAYCYDLRTTDGEHSSE
SGWTLAKLSATLSCCEKHVSLRSCIIVSLRRALLYPLYRHYELALRVFQDVVELLQVGKL
AIVKTLVDIMPLMRESDGRYIFNQLYIEPYTVWIQTVHPAHVRSLSEALAKKLASVDKED
LNLDLEEIEHVARLTLEDQALHDMERVSNQISGINLQDQSETSDDSSSESSPCSSTSEDS
FASSEDEDQSTEEHDKEKPGDAPNQIS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccccacggttcagtctacggcaagatgacgattgcctctatgcgaccatccac
gcacccttcaccaatttatccgagacggaggtgttcatggccgaccaggatttccgattc
ttctccaaaccttacttcctccgactgcatttacctcatgaagtggtggaggatgatcga
gccactgccaagtatgaggctgattcgcgatccttcatcgtcacggcccccaagaagaat
cacgggcagttctttcccgggttagatatgctgacctcgctcttaacgcctcagggcaat
gagagtctcaggcccacgggtggccatcatggcgcggtttcggtggggattgaggttctg
gatgctccgggggaagaagaggagactgacatcgattggtatttcgatcagcaaatcccc
gaatccgagccgaaacccgcttccgattgcgagtcctcgctcttgatcaggcgtgaggaa
ttccgctatggattcgccttcactgagcacggcgtgttcgaacgccttttgagcgagtat
caggagctgttggacattaaggatccggatcacactaatcacatgcatcgacgagccctt
cgaatcgccaaagaaaatgaagactttagcgaagaccactatttggccgacctgtatgac
tcggaccagatccagtattatctccaggctgctaacccctggcaagatttgctccaaaac
gaatcggatttggaggattggagcttgactgacgttgaaagagataaacttattgccttg
ccaaagaaagagtacttgattgagccagacagcctccaaagcgtctactatgggctgatc
gatattcttttcgcttactgctacgatctcaggaccacggatggggagcactcctcagag
tccggttggaccctggccaaactgagtgccaccctatcgtgttgtgaaaaacacgtgtct
ctgcgttcgtgtattattgtgagtctgcggcgtgccttgctttatcccttgtatcggcat
tacgaattggctttacgagtgttccaagatgtggtggagctcttgcaagtgggtaaattg
gccatagtcaagactctggtggacatcatgcctttgatgcgcgagagcgatggccgctac
atcttcaatcagctctacattgagccctatacggtgtggatacagactgtgcatccggca
catgttcgatctttgtccgaagctttggccaagaaattggcatccgtcgacaaagaggat
ctgaacctggacctcgaggaaatcgagcatgtggcccggttgaccttggaggatcaagcc
ttgcatgatatggaacgggtgtccaatcaaatctccgggataaatctccaagaccaatcc
gaaacgagcgacgactcgagtagtgagagctccccgtgctcctcaacttccgaagactcg
tttgcgagctcggaagatgaagaccaatcaacagaggaacatgacaaagagaagccggga
gacgctcccaatcagatatcctga
DBGET
integrated database retrieval system
