Tigriopus californicus (tidepool copepod): 131891323
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Entry
131891323 CDS
T09700
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131891323
04121 Ubiquitin system [BR:
tcf04121
]
131891323
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
131891323
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
131891323
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
131891323
NCBI-ProteinID:
XP_059096833
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All DBs
Position
12:17804175..17805460
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AA seq
322 aa
AA seq
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MKLEKVNWVSITTRLWTSVNTASYLALTIHFWDDDSSILQSFVLDCLRIKGRHTSLRLED
ELRSILIKHEVMSKIVVGVIDNGANIVKALRDIDIRQVPCYAHTLNLVAPGSIKDAPALI
KVKDTASKIVEQTKRSPVVQDKFEDIQRNRGHTRIKKLIQDVPTRWNSTFEMMERLVELR
GAVAELLTELGMSTKVGVVDSNTWQVLGEAVEVLQPLFEGTLELSGEKLTTGSKAIPLTT
MLMFRYDHLIEESDPGSIKCQLAKAIRGNPKRRFGALEDITELAIATLLDPRFKVNGSQS
SVKKDVAVEKLELVINMELQKV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggagaaagtgaattgggtcagcattacgacacgtctctggacgtccgtgaat
acagcaagttatttggctctgaccattcatttctgggatgatgattcatcaatcctccaa
tcctttgtactggattgcttgagaatcaaaggccgacacacctccctaagacttgaggac
gaattgagatccatcttaatcaagcatgaagtcatgtccaagattgtcgtgggcgtgatc
gacaatggtgccaatatagtcaaggcattgagggacattgatatccgccaggtaccttgc
tacgctcacaccttgaatcttgtggcaccagggtcgatcaaagatgcacctgccctcatc
aaggtgaaggacaccgcttccaaaattgtggagcaaaccaaacggagtcccgtggtccag
gataagtttgaagatatacagcgaaatcgaggccacacaaggataaagaaattgattcaa
gacgttccaacaaggtggaattcaacatttgagatgatggagcggcttgtagagctgagg
ggtgccgtggccgagctattgactgaactgggaatgagcacaaaggttggggtggttgac
tctaacacttggcaagtccttggagaagcagttgaggtacttcagcctctgtttgaagga
accctggaactctctggggagaaactaaccaccggttcaaaagctattccacttacgaca
atgctcatgttccgatatgatcatctcattgaggaatcggatcctggatcaattaaatgt
caattagctaaagccatccgtggtaatccgaagcgccgctttggggccttggaggatatc
accgaattagcaatcgcaacattgttagacccccgcttcaaggttaatggatcccaaagc
tctgtcaagaaggatgtggccgtggaaaaacttgagttagtgatcaatatggagttgcag
aaagtgtaa
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