Tigriopus californicus (tidepool copepod): 131891397
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Entry
131891397 CDS
T09700
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04137
Mitophagy - animal
tcf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131891397
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
131891397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131891397
03009 Ribosome biogenesis [BR:
tcf03009
]
131891397
04131 Membrane trafficking [BR:
tcf04131
]
131891397
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131891397
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131891397
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
131891397
Membrane trafficking [BR:
tcf04131
]
SNARE
SNARE associated proteins
Others
131891397
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131891397
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131891397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_33
CDC48_2
AAA_2
TIP49
AAA_22
NPHP3_N
AAA_14
RNA_helicase
AAA_28
Mg_chelatase
Parvo_NS1
AAA_17
nSTAND3
ATPase_2
Vps4_C
ABC_tran
AAA_7
AAA_lid_PRS2_C
AAA_18
NB-ARC
IstB_IS21
AAA_24
TsaE
NACHT
DUF815
Viral_helicase1
ResIII
Rad17
Zot
Motif
Other DBs
NCBI-GeneID:
131891397
NCBI-ProteinID:
XP_059096932
LinkDB
All DBs
Position
2:9220786..9226792
Genome browser
AA seq
807 aa
AA seq
DB search
MGNESDLSTAILKRKDRPNRLIVEDATTDDNTVVGLSQKKMDELNLFRGDTVLLKGKKRK
ETACIVLQDETVTDEKVRMHRVVRNNLRVRLGDVVAIQECPDAKYGKRIHVLPIDDTIEG
LTGNWFEVYLKPYFLEAYRPVHKGDIFKVRGGMRAVEFKVIETDPAPFCIVAPDTLIHCD
GEPVKREEEEDSLNAIGYDDVGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYG
PPGTGKTLLARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDE
LDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVVVMAATNRPNSIDPALRRFGRFDR
EVDIGIPDAVGRLEILRIHTKNMKLADDLDLDQVAAETHGHVGADLAALCSEAALQQIRE
KMDLIDLEDETIDAEVLNSLAVTMENFRFAMAKSTPSAIRETVVETPNVSWDDIGGLQKV
KLELQELVQYPVEHPEKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGP
ELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKSRGGSSGDAGGAADRVINQIL
TEMDGMGAKKNVFIIGATNRPDIIDGAILRPGRLDQLIYIPLPDEESRLSILKANLRKTP
IAKDVDLNFLARMTKGFSGADLTEICQRACKLAIRENIEHDIKKERERQAAANRKGSKWV
KGGGNMDVDEDEISEVSKKHFEEAMRFARRSVSDQDIKKYEMFSQTLQQSRGFGQNFRFP
DSAGGQPGGGQPTGGAFEEEGDDDLYN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgagagcgacctgtccacggccattttgaagcgaaaggatcgcccgaaccgt
ctcattgtggaagatgccaccacggacgacaacacggtcgtggggctctcccaaaagaag
atggacgagctcaacttgttccgcggcgacacggtcttgctcaagggcaagaagcgcaaa
gagaccgcatgcatcgtcctccaagacgagactgtcaccgacgaaaaggtccgcatgcat
cgcgtcgtccggaacaacctccgcgttcgcttaggtgatgtggtagccattcaagagtgt
ccggatgccaaatacggcaagcgcatccatgttttgcccatcgacgacaccatcgaagga
ctcacgggcaattggttcgaggtctacctcaagccctacttccttgaggcctaccgaccg
gtccacaaaggcgacatcttcaaggtccgtggcggcatgagagctgtcgagtttaaggtg
atcgagacggatcccgcgcccttctgtattgtggccccggacacgctcattcattgcgat
ggcgaacccgtcaagcgcgaagaggaggaggactcgctcaacgccatcggctacgacgat
gtgggcgggtgccgcaagcaattggctcaaatcaaagagatggtcgaactgccccttcgg
catccttctctgttcaaggccatcggagtgaagccaccccgcggtatcctcatgtacgga
cctccgggcacgggtaagaccctgttggcccgagccgtggccaacgagaccggagccttc
ttctttttgatcaacggaccagaaatcatgtccaagttggcgggagaatccgaatccaac
ctcaggaaagccttcgaagaggccgagaagaactcgcccgccatcatcttcatcgacgag
ttggacgccattgcgcccaaacgagagaagacccatggcgaagtggaacgacgcatcgtg
tcccaattgcttaccctgatggatggactcaagcagagatcccacgtggtggtcatggcc
gctaccaaccgtcccaattccattgatccggccctccgacgattcggtcgcttcgatcgt
gaagtggatattggcatccccgacgccgttggacgactcgagatccttcgaattcacacc
aaaaacatgaagctggccgatgacctcgatttggaccaggttgccgccgagacgcacggt
cacgtgggtgcggatttggccgcactctgctctgaggcagccctgcaacaaattcgagag
aaaatggatcttatcgacttggaggacgagacgatcgacgccgaggtcttgaactcgcta
gccgtgaccatggagaacttccgctttgccatggccaaatccacgccgtcggccatccgt
gaaaccgttgtggagacgcccaatgtcagttgggacgatattggaggcctgcaaaaggtc
aagctagagcttcaggagctggtgcaataccctgtggagcaccccgagaagttcttgaag
tttggaatgcagccttcgcgtggtgtgctcttctacggaccccctggatgtggtaagacc
ttgctcgccaaggccattgccaacgagtgccaggccaatttcatctccatcaagggaccc
gaacttttgaccatgtggttcggtgagagcgaggctaacgtgcgggacattttcgacaag
gctcgctctgctgctccttgtgtgctcttctttgacgagttggactcgattgccaagagc
cgtggcggttcttctggagatgctggtggagctgcggatcgagtcatcaaccagatcctc
acagaaatggacggcatgggtgccaagaagaacgtgtttatcatcggagccacgaacagg
cctgacatcatcgatggcgccattcttcgtccaggtcgattagatcagctcatctacatc
cccttgccggatgaggaatcccgattgtccattctgaaggccaacctcaggaagacccca
attgctaaggacgtagacctcaacttcttagcccgaatgaccaagggcttctcgggtgcc
gatttgacggagatttgccaacgcgcttgcaagttggccattcgcgaaaacatcgagcac
gatatcaagaaagagcgcgagaggcaggctgctgccaaccgcaagggttccaaatgggtc
aaggggggtggcaatatggatgtggatgaagacgagatcagcgaggtgtccaagaagcac
tttgaggaggctatgcgatttgcccgccgatctgtgtccgatcaagacatcaagaaatac
gaaatgttctcgcaaaccctgcaacaaagtcgaggatttggacagaatttccgattcccg
gattcggctggaggtcaacctggtggtggccaacccacgggaggagctttcgaagaagag
ggcgacgatgacctttacaattaa
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