Tigriopus californicus (tidepool copepod): 131891421
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Entry
131891421 CDS
T09700
Name
(RefSeq) unconventional myosin-Va-like
KO
K10357
myosin V
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
131891421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131891421
04131 Membrane trafficking [BR:
tcf04131
]
131891421
03029 Mitochondrial biogenesis [BR:
tcf03029
]
131891421
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tcf04812
]
131891421
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
131891421
mRNA cycle factors
P-body specific factors
131891421
Membrane trafficking [BR:
tcf04131
]
Others
Actin-binding proteins
Myosins
131891421
Mitochondrial biogenesis [BR:
tcf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
131891421
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
131891421
BRITE hierarchy
Motif
Pfam:
Myosin_head
DIL
IQ
ATG16
bZIP_1
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
131891421
NCBI-ProteinID:
XP_059097000
LinkDB
All DBs
Position
1:complement(8580758..8588734)
Genome browser
AA seq
1828 aa
AA seq
DB search
MAVAAFTPLINLYGQGSRVWIPHAGSVWCAAIILNDHVAGTSQTLEVETEEGLERHVLKI
KSPDDLPPLRNPEILVGENDLTSLSYLHEPAVLHNLSVRFMQNQSIYTYCGIVLVAINPY
EELHIYGADTIGMYRGKNMGDLDPHIYAVAEEAFTKMERDARNQSIIVSGESGAGKTVSA
KYAMRYFATVGGASQTETQVEKKVLASSPIMEAIGNAKTTRNDNSSRFGKYIEIDFNKFF
HIIGANMRTYLLEKSRVVFQASDERNYHVFYQMCAGRNEEPLAGCHLDEPEAFFYLNQGD
APQIEGVDDLKELQSTLEAFKLLGFSSHDQTRILRILSGVLHLGNVEIESGSGRGDSETS
TIEANDPSLKIMAELFEIEEDQFRKWLCYRKIVTTRETYTKPMNAQAALFARDALAKCIY
AYLFDWIVLHINKALRTTGKANKFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNLH
VFKLEQEEYLKEGIDWKMIDFYDNQPCIDLIESKLGVLDLLDEECRMPKGSDKSWVEKLY
DKCKKWEHFSKPRLSQTAFIVKHFADMVEYESSGFLDKNRDTVMEEQTNILRASNNDLLS
DLFMDKVSKAGAGKAGKSPGGPGGGTKQNKKTVGSQFRDSLNLLMTTLNATTPHYVRCIK
PNDEKAAFQFDPKRAVQQLRACGVLETVRISAAGYPSRWTYYDFFLRYRVLCHSRDVKKN
DHRTTCENIISKLINDEDKYRFGKSKLFFRAGQVAYMEKLRSEKLRECGIMIQKHVKGWL
YRKKYQKTKSSTLTMQRWVRGFLARRRTRHIRRTQAATTIQRFVRGWLNRVQYQRVQRST
IRLQAQIRGYLARKKHLELVRNAKAIIIQMNARGWLQRQKYQRTLRHIVMVQCQIRRFMA
KRQLKRMKIAAKSIEHQKKLNEGLENKIISLQQKLTQTQQQNKAFKGLKNDHDNALKELE
ILKKSDQANKGALKNLSSLEEELAAVKLELQRERDEKMDIVNTSEKRLSSLQSENDAKES
ELVQLKAELAQVQEQVTNQGQVNAEEMNRKFTEEKAQIHQEYEQERIAYQKLLKDYNRLE
AQFENLQDEVHQNRAGSNMSFVSSSFTSDFHGEEESAYGSQSGRSSMRSSGVPDRGRLDQ
VDWEKGMESDVALTLKLQQKLKEAQRDKEKLEKRLEDLESSEAAQVNEKQAADRIRLQEL
EMENSKLQGDLKRMRESLADDSGDNEQLKEMMEQFEQLQDEVDRRREECIQLRTVLATAS
LDEQPFSLLSRSSELPEAEELFTAYETQKNVIAQLQDQLTEEKAKSREVEGDLRSELEKI
TKTSHEQQMVINNTINRDPVNNTELCLQHEITRLTGENFDLREKIESLNDTIKRLKRQLR
AYFKKLNEMGANPSDLNASEIEQEALQHTQTPLETNLPVIRKKEHDYHGLFEYKKENEQP
ILKALIYDLKPKTAVQFLPGLPAYILFMMIRYIDFINGEAYVRNLIQGSVNMMKKVIKKK
GMNDLEVKTLWLSNLLRLLHNLKQYSGEPQFQDGSTQKQAEQCLRNFDLSEYRRVLSDVS
IWIYQGITKLMEEEIQPILVPAILEHEGIGRTGMAGGAAKSRRPPSHSANNNDMESPAHI
DPQEAFNNLLSLLTRFHGILTKHGLDPEIIAQIFKQVFYFICAGSLNNLLLRKDLCHWSK
GMEIRYNLAQLEQWARDQKVLDEQAKAPDALAPIIQASQLLQARKTDEDVPVICGMCTSL
KVSQIIKILNLYTPADEYEEKVTPSFVRKIQATLQARAIQESQQATTLLMDTKFSFAVRF
PFNPSRIQLEELEIPETYNNLHTMLKKV
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggctgctttcacgcctctcatcaacctttacggccagggatcgcgggtctgg
attccccatgccggctccgtgtggtgtgcggccatcatcctcaacgaccatgtggctggc
acatcccagacgttggaagtcgaaaccgaggaaggactcgagcgtcatgtgctcaagatt
aagagcccggacgacttgccgcccctccgaaatcccgaaattctcgtcggagaaaacgac
ttgaccagtttgtcctacttgcacgagccggccgttctccacaatttgtccgtccggttc
atgcaaaaccagtcgatatacacatactgcggtatcgtgttggtggccattaatccctat
gaagaattacacatttacggcgccgatacgatcggcatgtatcgaggcaaaaacatgggc
gatctcgacccgcacatctatgccgtggctgaagaggccttcaccaaaatggaacgggat
gcccggaatcaatcgattatcgtgtcgggcgagtcgggcgcgggcaagacggtgagcgcc
aaatatgccatgcgttattttgccacggtgggcggcgcctcgcagaccgagacccaagtg
gagaagaaggttttggccagttcgcccatcatggaagccattgggaatgccaagaccacc
cgaaacgacaactcgtcgagatttggcaaatacatcgagattgatttcaataagttcttc
cacatcatcggagccaacatgcgtacctatcttttggaaaaatctcgggtcgtatttcag
gcctcggatgaacggaattatcacgtgttctaccaaatgtgcgccggtcgcaatgaagag
ccgttggcgggatgtcatctcgacgagcccgaggcttttttctacttaaatcaaggcgat
gccccccagattgaaggcgttgacgatctcaaggaacttcagtctaccttggaggccttc
aaattgttgggcttcagttctcatgatcaaacccgaatcctgcgaatcctgtccggagtc
cttcatttgggcaatgtcgagattgaatccgggtctggtcgtggcgattccgagaccagc
accattgaagccaatgatccgagcttgaagataatggccgagttgttcgagattgaagag
gatcaattccggaagtggctgtgctatagaaaaattgttaccacaagagaaacctacacc
aaaccaatgaacgcccaagcggccttgttcgcccgtgatgccctagccaaatgcatttat
gcttatttgttcgactggatcgtcctccacataaataaagccttaagaaccaccggaaaa
gcgaacaaatttatcggtgttttggatatttatggctttgagacgttcgaagttaacagt
tttgagcaattctgcattaattacgccaacgaaaagctacagcaacaatttaacttgcat
gttttcaaattggagcaagaagaatacctaaaagaaggcatcgattggaagatgatcgat
ttctatgacaatcagccttgcattgatctcattgaaagcaaattgggagtgttagacctc
ttggacgaagagtgccgaatgcccaagggatccgataaatcttgggtggagaagttgtac
gataagtgcaagaaatgggagcatttctctaaacccagactcagtcaaaccgcatttatt
gtcaaacactttgccgatatggtcgaatacgagagctccggatttctcgataagaaccgt
gatacggtcatggaggagcagaccaacatcctgagagccagtaataatgacctcctcagt
gatctcttcatggacaaagtatcaaaagccggtgcgggcaaagctggaaaatctcccggc
gggccaggaggaggaacgaaacagaacaaaaagaccgtgggatcccaattccgagactct
ttaaatctcttgatgacgaccttaaatgcgacaacgccccattatgtcagatgcatcaaa
ccgaacgacgagaaggcagctttccaatttgatccaaagagagcagttcaacaactccga
gcttgtggagtgcttgaaactgtacgaatcagtgctgcgggctatccatcgagatggact
tattacgacttcttcctgcgatatcgagtactctgtcattcgcgggatgtcaagaagaat
gatcaccgaacgacctgcgagaatatcatatcgaaactcatcaacgacgaagacaagtat
cgattcggcaaatctaagttgttcttccgtgccggtcaagtagcctacatggagaaactt
cgctcggaaaagctccgcgaatgtggaatcatgattcaaaaacatgtcaagggatggctc
taccggaagaagtaccagaagaccaagtcctctacgctcaccatgcagcgttgggtccga
gggttcttagcccgtaggcgaactcgtcatatcaggagaacccaggcggccaccaccatt
cagcgattcgttcgcggatggctcaatcgtgtccaatatcaacgtgttcaaaggtccacg
attcgcttacaagcgcaaattcgcggctatttggccaggaaaaagcacctcgaacttgtg
cgcaacgccaaggctatcatcatccaaatgaacgctcgtggttggctacaacgacaaaaa
tatcagcgtactctccgccacatagtcatggttcaatgtcaaatccgtcgctttatggcc
aagcgacaacttaagcgcatgaagattgctgccaaatccatcgagcaccaaaagaaactc
aacgaaggtctggagaacaagatcatcagcctgcagcaaaagctgacgcaaacgcagcaa
cagaacaaagctttcaagggcctcaaaaacgaccacgacaacgctctcaaagagttggag
attctcaagaagtccgaccaagcaaacaagggggcactcaagaacttgtccagtttggaa
gaggaactggcggcggttaaactcgaactgcagagggaacgagacgaaaagatggacatc
gtcaataccagtgaaaagcgcttgtcgtccctacaaagtgagaacgatgccaaggaaagc
gagttggtccaactaaaggctgagctcgctcaagtccaagaacaagtcaccaaccaagga
caggtgaacgccgaagagatgaatcggaagtttaccgaggaaaaagcccaaatccaccaa
gagtacgagcaggagcggatcgcctaccagaagctcctcaaggactacaaccgattggaa
gcgcaattcgaaaatctccaggacgaagtgcaccaaaaccgagcgggttccaacatgtca
ttcgtgtcgtcttcattcacgtctgatttccatggagaggaagaatcggcatatggttcg
caatcaggccgcagttcgatgcgttcgagtggcgttccggatcgaggccgattggatcaa
gtcgattgggaaaagggcatggagagcgatgttgccttgaccttgaagctccagcagaag
ctaaaggaggctcaacgagacaaggagaaactagaaaagcgactcgaggatttagagtcc
tccgaagccgctcaggtcaatgagaagcaggcggctgatcggatccgtctccaggaactc
gaaatggaaaattccaagcttcaaggggatttgaagcgcatgcgcgaaagcctagctgac
gactccggtgataatgagcaactgaaggaaatgatggagcaattcgagcaactccaagac
gaagtggatcgtcgtcgggaggaatgcatccaattgcgcacggttcttgccactgcctcg
ttggatgagcaacccttctctctgttgtcacgctcgagcgagctcccggaagccgaggag
ctcttcacagcttacgaaacgcaaaagaacgtgatagcccagcttcaagaccagttgacc
gaagaaaaggccaagagccgggaagtggagggagacctccgatcggaactggaaaagatc
accaaaacaagccacgaacagcagatggtgatcaacaacaccataaatcgggacccagtc
aacaatacggagctgtgtttacaacacgagatcacgcgcttgaccggagagaattttgac
ctaagagagaagattgagtcattaaacgacacaatcaagcgactcaaacgacagcttaga
gcctacttcaagaaactgaacgaaatgggtgctaatccctccgatttaaatgcgagcgaa
atcgagcaagaagccttgcaacacactcaaacacctttggaaacaaacttgcctgtgatc
aggaagaaagagcacgactatcacggactgttcgaatacaagaaagagaacgagcaaccc
atcctcaaggcactcatttacgatttgaagccgaaaaccgccgtacaattcctgccggga
cttccagcctacattctgttcatgatgattcgatacatagacttcatcaacggtgaagcc
tatgtgcgaaatctgatccaggggtctgttaatatgatgaaaaaagtcatcaagaagaag
ggcatgaacgacttagaggtgaagaccctttggctgtccaaccttttgcgattactccac
aacctgaagcaatactctggtgaaccacaattccaagacgggagcacccaaaaacaagcg
gaacaatgccttcgaaatttcgacttgtcggaatatagacgagtgctgagtgatgtctcc
atttggatttaccagggcataaccaaactcatggaggaagagatccagcccattctggta
cctgccatcctagagcatgaagggattggcagaacaggtatggcgggcggagcggccaag
tcccgacgcccaccatcgcattcggccaacaacaacgacatggaatcacccgcccacatt
gacccccaagaggcgtttaacaatctattgtcacttttaacccgcttccatggcatcctg
acgaaacatggactcgatccggagatcattgcccagatcttcaagcaggtgttctatttc
atttgtgcgggtagtctgaacaaccttcttcttcggaaggatctgtgccattggtccaaa
ggcatggaaatccgctacaacctagcgcaacttgagcaatgggctcgggatcagaaagtc
ttggacgagcaagccaaagctccggatgcgctagccccaattatccaagcatcacaactt
ctacaggcccgtaagaccgatgaggacgttcctgttatctgtggcatgtgcacgtccctt
aaggtgtcccaaatcatcaaaatccttaatctctacactcccgccgacgaatacgaggag
aaggtcactccgtcgtttgtgcggaaaatccaagccaccctccaagctcgtgcgatccaa
gaaagtcagcaagcgaccacgctactcatggataccaaattctcctttgccgtccgattt
cctttcaatccgtcgcgaattcaactggaagagctagaaattcccgaaacatacaacaat
ctccataccatgttgaagaaggtatag
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integrated database retrieval system
