Tigriopus californicus (tidepool copepod): 131891693
Help
Entry
131891693 CDS
T09700
Name
(RefSeq) THO complex subunit 4-like isoform X1
KO
K12881
THO complex subunit 4
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03013
Nucleocytoplasmic transport
tcf03015
mRNA surveillance pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131891693
09122 Translation
03013 Nucleocytoplasmic transport
131891693
03015 mRNA surveillance pathway
131891693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131891693
03041 Spliceosome [BR:
tcf03041
]
131891693
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131891693
TREX complex
131891693
Spliceosome [BR:
tcf03041
]
Complex C
Other components
EJC/TREX
131891693
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131891693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
131891693
NCBI-ProteinID:
XP_059097302
LinkDB
All DBs
Position
12:complement(9162084..9167302)
Genome browser
AA seq
321 aa
AA seq
DB search
MTNSPMWYPSRLPPFERHSTQASNDRRSSTNKSAKPHPLNHNPPYTFKTSIIMTDKIDMS
LDDIIKKNKPARGGGRGGASGRSRGGGAAGRGSRGGAPRRGGRGGAAVGGARRSAGGAGG
RAASRPYTRGNADGSWKHDLFDGPRRGGVATSSGPAKLIVSNLEFGVSDSDIQELFSEFG
HLKQAAVHYDRSGRSLGTADVVFDRKADAIKAMKQYNGVPLDGRAMSIQLVGSSAEVSNG
SPRRSMGGAPTRRIRGTDRRRSGGGAGGRVEKPKRGAGRGGAGKAAGGRGAKRGGRGGAK
KTPTPTAEDLDKELDSYLKAR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacgaattcaccaatgtggtatccgtcacgcttgccaccctttgagcgccattccacg
caagcttctaacgataggagaagctcaacgaacaagtccgccaaaccacacccgcttaac
cacaatcccccatacacattcaaaacctcgataatcatgactgacaaaattgacatgtct
cttgatgacatcatcaagaagaacaagcccgcccgtggcggagggcgtggtggagccagc
gggcgctctcgcggaggtggcgcagccggacggggaagtcgcggaggagcgcctcgcaga
ggaggccgcggaggcgctgccgtcggtggtgcacgccgctcggccggtggcgcaggtggc
cgagccgctagtcgtccctatactcgtggaaacgctgatggaagctggaagcatgacctc
tttgacggacctcgacgagggggagtggccacctcatccggcccagccaaactgattgta
tccaatcttgaatttggcgtatcggattccgatatccaagagctcttctcagagtttgga
cacctcaagcaagccgctgttcactacgaccgttccgggcgctcattgggaaccgcagat
gtggtctttgaccgtaaagccgacgccatcaaagccatgaagcagtataatggtgttccg
ttggacggcagagccatgagcatccagttggtgggttcctctgccgaagtatccaatgga
tctccccgtagatccatgggtggtgctcctacccggcgaatccgaggtaccgacagacgc
cgctcagggggaggagctggagggcgtgtcgagaagcccaagcgcggggcgggccgtggt
ggagcaggcaaagctgctggcggacgcggtgccaagcgagggggtcgtggaggagccaag
aaaacacccactcccaccgccgaagacttggacaaagaattggactcttacctcaaagcc
cgttaa
DBGET
integrated database retrieval system
