Tigriopus californicus (tidepool copepod): 131891825
Help
Entry
131891825 CDS
T09700
Name
(RefSeq) TRAF3-interacting protein 1-like
KO
K19680
TRAF3-interacting protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcf03037
]
131891825
Cilium and associated proteins [BR:
tcf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
131891825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIP-T3_C
MIP-T3
TACC_C
SHE3
Motif
Other DBs
NCBI-GeneID:
131891825
NCBI-ProteinID:
XP_059097476
LinkDB
All DBs
Position
12:8397211..8400320
Genome browser
AA seq
611 aa
AA seq
DB search
MSVAPAVIKKTQESLGKYLSKPPLTEKLLARPPFRFLHDVICGVIKQNGIFKGLLDNKEM
VSDNVTKDRDSKIKFLEKVIFGTSFAIGENLPVKAGKIVSGQEGDKTNELLQALGRILDE
GIDTSEAVKRVKKGEKPGKSTGPAGKKGSSDKKGKENVPQSRRGSKGAVTGVKDKGGKSS
QPSRESTAKSTRSISSAKPIETINEDSNEAAPLDENGPMETLSEEPAPPKNGHPEPEQDE
LITNGHNLDDQEESAIGGLEDEQNLGLEPQLDAPANNEPQEFQEMEPNLPEEDPDQHSMN
ERPRTSAPSARPRTSGSQRSPPVEPPEENAPEPSFPLPTAQGPTPRPGSAMRSARPRTGR
LKSGRPPSARPAAPRLKDKVEIQTEEAIQARPQTGRVANVILAGDEKDDDDDGEEFLVEE
KPKDDLDFLTENSGSLQADPEALQSGAQEHGGLVQQILETQKELEEKPKEKKGVEIERDS
GLSDIGKRRDRESTQREVDKLRSSIQTLTRSANPLGKLMDFLQEDVDAMQRELETWKNEN
RRMQLDLKQEQAMTEKSIEPLKIHLADLEGAVQEQLDKISVIKSNIIRNEERIYRMITSI
GTTSVGSGGGR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgcccgcagtgatcaaaaagacccaagagtctttgggcaagtatctgagc
aaacctcccttaacagagaagcttttggcacgacccccgtttcggttcctccatgatgtg
atctgtggtgtgatcaagcagaatggcattttcaaagggctcttggataataaggagatg
gtctcggacaatgtgaccaaggaccgtgatagcaagatcaagtttctggagaaggtcata
tttggcacttcattcgctattggcgagaatctacccgtcaaggccgggaagattgttagt
ggtcaagaaggagacaagaccaatgagcttcttcaagccttgggaaggatcctggacgaa
ggcatcgacacatctgaggcagtgaaaagagtgaagaaaggtgagaaacctggaaaatcc
actggacccgcaggcaagaagggatcgagcgataagaagggcaaagagaatgttccccaa
tcgcgaagaggatccaaaggtgcagtcaccggtgtcaaagacaagggtggcaagtccagt
caaccatcgcgcgagtccacggccaagtccacacgcagcatttcctcagccaaaccaatc
gagacaatcaacgaggactcaaatgaggcggcacctctcgatgaaaatggaccaatggag
acactcagcgaggaaccggcacccccgaagaacggccacccagaacccgagcaagatgaa
cttatcactaacggacataacttagacgaccaagaggaatcagccattggtggtctagaa
gatgagcaaaatcttggtttggagccacaattggacgctccagcaaataatgagccccag
gagtttcaggaaatggaacccaacttgcccgaagaagacccagatcagcacagcatgaat
gaacgacctaggacctcagctccttctgctcgtcctaggacgtcaggtagtcagcgaagt
cctccggtcgaacctcctgaggaaaacgcgccagaaccgtcattcccattaccaaccgct
caaggtccgaccccacgacctggcagtgctatgagaagtgcccgaccacgaacgggccgc
ctgaaatccggccgtcctccgtctgcccgaccggccgctcctcgattgaaagacaaagtg
gaaattcaaacggaggaggcaatccaggcccgaccgcaaacgggtcgggtggcaaatgtg
atcttggccggcgatgaaaaggacgacgacgatgatggcgaagagtttctagttgaggag
aagccaaaggacgaccttgattttctcacggagaattcgggatccctacaggcagaccct
gaggcacttcaatctggagctcaagagcatggagggcttgtgcagcaaatcctggagacc
cagaaggaactcgaagaaaagcctaaggagaagaaaggcgttgaaattgaacgggattca
ggcttgagcgacattgggaagcgcagggatcgcgaatctacccaaagagaggtggataaa
ttgaggtcgtccattcagacgctcactcgatccgcgaatcctttaggaaaactgatggat
ttcttacaagaggacgtagacgctatgcaaagagaattggaaacttggaaaaacgagaat
cgccgcatgcaattggacctgaaacaagagcaagcaatgacggaaaaatctattgaacca
ttgaaaatccatctcgcggatttggaaggagccgttcaagaacagctggataaaatctcc
gtgatcaagtcaaacataattcgaaatgaggagcgaatctaccgcatgatcacttccatt
ggcaccacgtcagttggatctggaggtggaaggtaa
DBGET
integrated database retrieval system
