Tigriopus californicus (tidepool copepod): 131891887
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Entry
131891887 CDS
T09700
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcf03037
]
131891887
Cilium and associated proteins [BR:
tcf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
131891887
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GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
DUF4350
Tox-REase-3
DUF4159
Motif
Other DBs
NCBI-GeneID:
131891887
NCBI-ProteinID:
XP_059097558
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All DBs
Position
12:3411708..3414187
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AA seq
437 aa
AA seq
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MAPTSADYINTNEEKSNAIIFDTTKDELFRLSDNYKTLQRKLKGNWRISSNREDSTITID
ALNQARVFVLAGPREKFNENEIDHLKKYLETGGCLLVLLGEGGEKRFDTNINFFLEEYGI
MINSDAVVRTNYHKYFHPKECLVSNGVLNRAISEAAGKTGTKASFLEYEQDINNAQALSF
VYPHGATLNVARPATPILSTGSVSFPLNRPVCALFTHPGSGGKLAVLGSGSMLADQYIEK
EDNNKIKDVIFEFLTTDNISLNKIDMDDPDISDYQMIPDTCYLSNRLRSCLQESDEVPSD
FTRLFDTKLYSISTSMLPASINAYAELSVKHEPLKLITPQFETPLPPLQAAVFPPSFREL
PNPKLELFDLDEAFSSEKSRLAQITNKCTDEDLDYFIREGADVMGITQHLPLEAHEPKRI
VEYMLTHIAEFKKLNQE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccccgaccagtgcggactacattaacacaaatgaagagaaatccaatgccatcata
ttcgataccaccaaagatgaactcttcaggctcagtgataactacaaaacccttcagagg
aaactgaaaggaaattggaggatttcgagcaatcgcgaagacagtaccatcaccatcgat
gccttgaatcaggctcgtgtgtttgttttagccggacctcgagagaagttcaacgaaaat
gagattgatcacttgaagaagtacctggaaacaggtggatgtctcctcgttcttctgggc
gaaggtggagagaagcgtttcgataccaatatcaattttttcttggaggaatacgggatc
atgatcaactcagatgccgtggttcgaaccaactatcacaagtactttcatcccaaggag
tgtttggtctcgaacggggttcttaatcgagcaataagtgaagcagccgggaaaacgggg
accaaagctagttttcttgaatacgaacaggacattaataacgcccaggccttatcgttc
gtgtatcctcatggagctacgctgaatgtggcccgccctgccacgcccatcttatcgact
gggagtgtctccttcccactcaatcggccagtttgcgctctcttcactcacccaggaagt
ggaggcaagctggccgtgttaggatccggatccatgttggccgatcaatacatcgaaaaa
gaggacaacaacaagataaaagacgtcatctttgaattcctgaccacggataatattagc
ttgaacaagattgacatggatgatccagacatctcggactatcaaatgatcccggatact
tgctacttgagcaaccgactccgctcctgcctccaagaatcggatgaagtgccctcggat
tttacaagacttttcgatacgaagctgtactcgatctccacctccatgctcccagcatca
attaatgcctatgcagagctatctgtcaaacacgaacccctgaaattgatcacacctcaa
ttcgagacgcctttgccacctttacaagcggcagttttcccaccctcatttcgggagttg
cccaatcctaagctggagttgttcgatctggatgaagccttctcttcggaaaaatctcgg
ttggcccagattacgaacaagtgcacggatgaggacttggactactttatccgcgagggg
gccgatgtcatgggtatcactcaacatttgcccctggaggcccatgagcccaagcgaatc
gtggagtacatgctcacccacattgccgagttcaagaagctcaaccaagagtag
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