Tigriopus californicus (tidepool copepod): 131891890
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Entry
131891890 CDS
T09700
Name
(RefSeq) integrin beta-PS-like isoform X1
KO
K05719
integrin beta 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04145
Phagosome
tcf04512
ECM-receptor interaction
tcf04820
Cytoskeleton in muscle cells
tcf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
131891890
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131891890
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
131891890
09142 Cell motility
04820 Cytoskeleton in muscle cells
131891890
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131891890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131891890
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131891890
04515 Cell adhesion molecules [BR:
tcf04515
]
131891890
04090 CD molecules [BR:
tcf04090
]
131891890
Membrane trafficking [BR:
tcf04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
131891890
Exosome [BR:
tcf04147
]
Exosomal proteins
Proteins found in most exosomes
131891890
Cell adhesion molecules [BR:
tcf04515
]
Integrins
Integrin beta subunits
131891890
CD molecules [BR:
tcf04090
]
Proteins
131891890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
EGF_2
EGF_Teneurin
I-EGF_1
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
131891890
NCBI-ProteinID:
XP_059097563
LinkDB
All DBs
Position
2:complement(10584320..10596401)
Genome browser
AA seq
825 aa
AA seq
DB search
MFWPKGILGLYLSLSHLYLSVFSVSDHFRTYGSFLNKRNNSCTALDKSCDECIQNIDCVW
CVDPEFPLGNSRCDLKEWFSSNKSRCGLVEDPSTIITILEDRPLTPHASSDDDFVQIRPQ
RIKIRARVGKEVTVKFQVAHAKQYPVDLYYLMDLSNSMSDDRDNIVKLGRDLASSIQEIT
RDFRIGFGSFVDKEVMPYISLVKGKNCQQKKCPLPYSFQHQMSLGPDARLFQRKVKEAPL
SGNIDNPEGGFDGLVQVIVCSKQVGWRDKARRVIIFTTDQTFHIAGDGKLGGIVVPNDGQ
CHLNATGFYDYAKHQDYPSIAFINELAKNYSVSMIWAVTADKFQLYDMLSTMVEGSTAGQ
ISTDSSNIVKLVRAQYEKITTSIKAITNSSTSCPSRITSECEGNGPKCENVQLGMAKNFE
LHFRLTECQSETFAVSPVSLNDKMIVEVEPFCECPCDTSEGVANEEEATLEQSQDCNYHG
RLSCGECLCSNDFFGPKCECSKNPNTNLTINMDDIFATCIKPNISFPFLCSGRGSCDCGV
CKCDSPKEGVIISGLFCDNVCDNTACERDESNQTCSGQGKCVCGECVCNPPWTGPKCNCF
QNKDPCRSSESPHLICSGHGICPCDSCICTDDGWSGPLCNECEVCGSICENLRLCVEFLA
FQDEKMVSEPYETEEERLGIIANATERCQTLLTYSEEFPEDIPKNYENCTFLRNNCRYIF
SYEPIAGIFDTRQVYLHLTDDGLKEVCPPPADYLGLIFGLIGAIVFVGLITVLLWKAFTT
IHDRREFAKFEAERMNIKFPSHSNPIFKQATTTIQNPIFNHPDYL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgttttggcccaaagggattttgggactgtatctcagtctcagtcatctgtatttgtca
gtgttcagtgtttcggatcattttcggacttatggctcattcttgaacaagagaaacaac
tcctgtacagccttggataaatcgtgtgacgagtgcattcagaatattgactgtgtttgg
tgtgtggatcccgaatttcctttgggaaacagtcgatgtgaccttaaagaatggttctca
agcaataagtcaaggtgtggtctggtggaggatccatcaaccatcatcaccattttggaa
gatcgtcccctaactccacatgccagctccgatgacgatttcgtccaaatcaggccacaa
cggattaagatccgagcaagggtgggcaaagaggtcactgtcaaattccaagtggcccat
gcgaagcaatacccggtggacttgtattatctcatggatttgtccaattccatgtcagat
gatcgggataatattgtcaaactgggtagagatttggcttcatccatccaggagatcaca
cgggactttcgcatcggttttgggagcttcgtggataaagaagtcatgccctacatcagt
ttagtcaaggggaaaaactgccaacagaagaaatgtcccttgccctatagttttcaacat
caaatgagtctaggaccggatgcaagactctttcaacgaaaggtcaaagaagcgcctcta
tctgggaatatcgacaatcctgaagggggattcgatggacttgtgcaggtcatcgtgtgt
tcaaaacaagtgggttggcgcgacaaagccagacgagtcatcatcttcaccaccgaccag
acctttcacattgccggtgatggcaaattaggcggaattgtggtgccaaacgatggtcaa
tgccatctcaatgccacaggtttctacgactacgccaaacaccaagactatccaagcatc
gccttcatcaacgaattggccaagaactactcagtctccatgatctgggctgtgaccgcc
gataaatttcaactctatgacatgctctccacaatggtggaaggatctacggcgggtcag
atttcgacggattcttcgaatatcgttaaactcgtccgtgcccaatacgagaagataacc
acgtctataaaagcgattacgaattcttccacctcttgcccgagtcgaatcacatccgaa
tgtgaggggaatggtccgaaatgtgagaatgtccaactgggaatggccaagaatttcgaa
ttgcatttcagactgacggaatgtcaatcggaaacatttgcagtgtctccagtgagcttg
aacgacaaaatgattgtggaggttgaacctttttgcgagtgtccctgtgacacttccgaa
ggtgtcgcgaatgaggaagaggcaactttggaacaaagtcaggattgcaattatcatgga
cgattgagttgtggcgagtgtctgtgttccaacgacttctttggacccaaatgtgagtgt
tccaagaatccgaatacgaacttgacaatcaacatggacgacatctttgccacgtgtatc
aagcccaatatttcgttcccgttcttgtgtagtgggcgtggcagctgtgactgtggtgtg
tgcaaatgcgactcgcctaaggaaggagttatcatttctggactgttttgcgacaatgtc
tgcgacaatacagcttgcgagagggacgaatccaaccaaacctgcagcggccaagggaaa
tgcgtttgcggcgagtgcgtctgcaacccaccatggactggtcccaaatgtaattgtttt
cagaacaaggatccttgtcgctcttctgaaagcccgcatctgatttgttccggtcatggg
atatgcccttgcgacagttgtatttgcaccgatgacggatggagcgggcccctttgcaat
gaatgcgaagtctgcggttccatttgcgaaaacctccgactatgcgtcgagtttctggcc
tttcaagatgaaaaaatggtctcggaaccttatgagactgaagaggaacgattgggcatc
atcgccaatgccactgaaagatgtcaaaccttattgacttattctgaagagttcccagag
gatattcccaaaaactatgagaactgcacgtttttgcgcaataattgtagatatattttt
tcttatgagcccatagcgggcatctttgacactcgtcaagtctatctgcaccttactgat
gacggtctcaaagaggtttgtcctcctcccgccgattatctgggtcttatttttgggctc
attggagccattgtgtttgttggtcttattaccgttttattgtggaaggccttcaccaca
attcatgacaggcgagagtttgctaaatttgaagctgaacgtatgaatatcaagtttcca
tcccactccaatccaatttttaaacaagccaccacgacgattcaaaatccaattttcaat
caccctgattatctgtga
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