Tigriopus californicus (tidepool copepod): 131892048
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Entry
131892048 CDS
T09700
Name
(RefSeq) glutamate receptor ionotropic, kainate 2-like
KO
K05313
glutamate receptor, ionotropic, invertebrate
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131892048
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Glutamate (ionotropic)
131892048
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
131892048
NCBI-ProteinID:
XP_059097759
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Position
12:12892262..12904709
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AA seq
929 aa
AA seq
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MIGWWFRIWSLLGLLSKVLPLPSQIRIGAIFTDDQKDCPAELAFKYAIYKINKAHDVLPN
NTLVYDIQYVPKEDSFRTTKKVCNQVEHGLLALFGPSDLLLGGHIQSICDALDIPHLEAR
NDFENNFKEFSLNLHPSQEMMNQAYKDIMTYLNWTSAAILYEDEYGLIRLQDLVRSPPSR
NIELYIRQTVPRNYRAVLREIKKKGITNILVDTDPVNMKYFFRVILQLQMNNPNYHYSFT
SFDVETFDLEDFKYNDVNITAFRIVDLDNPRVKEELFEMEAISPIGTAILNRSQSILTEP
ALIYDSVYVFAKGLEKALTEGPELFMTTLSCEEELPWNGGSTLLKYISSIETEGLTGPIS
FSDNKRSDYKLDLLKLREHKMVKVGEWNPRQGLNITDPYAFTQGRPPNITLRVMTRIEQP
FVTFTKIKDGAEPIGNDRFEGFCVDLLEHIAELVGFNYVIELIPDNNYGALDLSTGEWNG
LVRELMYDNADLAMGAMTINFAREAVIDFTKPFMNLGISILYKIPSGKPTRLFSFMNPLA
VEIWLYVLAAYMLVSFTLFVMARFSPYEWNNPHPCITENEVKENQFSVSNSFWFITGTFL
RQGSGLNPKAASTRIVGAIWWFFTLIIISSYTANLAAFLTVERMITPIENDEDLAKQSEI
AYGTLSGGSTMTFFRDSKIDVYKKMWNFMENHQPSVFVTNYDEGISRVKRGGYAFLMEST
MLDYVVQRDCNLTQIGGLLDSKGYGIATPKGSKWRDHLSLAILELQEKGTIQMLYNKWWK
NTGDVCTRQDKSKDSKANPLSVKNIGGVFVVLLCGLSLAIVVAVLEFCWNSRKNAQSDHQ
SLCSEMAEELRFAMRCRGARQKPALRRSCSRCSPENTYVPSSLEFSKALNGSEKTVYSGA
FGFNDMIAHAHGEGESLTNGQAHHDHIYD
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgattggttggtggtttagaatctggagccttttggggctcttgagcaaagtgttacca
ttgccgtcccaaatccgaattggagccattttcactgatgaccaaaaagactgtccagct
gagctggcctttaaatatgccatctacaagatcaacaaagcccacgatgttctgcccaat
aatactctggtgtatgacatccaatacgtaccaaaggaagactccttccggaccaccaag
aaggtctgcaatcaagtggaacatggccttttggctttgtttgggccttcggacttgctc
ctaggtgggcacatacagagcatttgtgatgcccttgacattccccatttggaggccagg
aacgatttcgaaaacaacttcaaagagttctcattaaacctccatccttcgcaagaaatg
atgaaccaggcctacaaagatatcatgacttatctgaattggacctcggctgccatcctt
tatgaagatgaatatggtctcatccgtcttcaggatctggtccgatcgccaccttctcgg
aacatcgagctctacattcgtcagactgtgcctcgcaattaccgagctgtcttaagagag
atcaagaaaaagggaatcacgaatatcctcgtggatactgaccctgtcaacatgaagtac
ttctttcgggtcattcttcagcttcaaatgaacaatcccaattatcattactcattcacg
tcgtttgatgtagagactttcgatctcgaggatttcaagtacaacgatgttaacatcacc
gcgtttagaattgtggatttggacaatccacgggtcaaggaagagctctttgaaatggag
gccatttcccccattggaacggccattctgaatcgatcccaatccattctaactgagcct
gccctgatttatgattcagtttacgtgttcgccaaaggcttggaaaaggcccttaccgaa
ggccctgagctcttcatgacaaccctctcttgtgaagaggaacttccgtggaatggggga
tccacgttgcttaagtatatctcctctatcgagaccgagggtctcacagggccaattagc
ttctccgacaacaagagatccgattacaagttggatttgctgaaacttcgtgaacataag
atggtaaaagtaggagaatggaacccaagacaaggattgaacatcactgatccatatgcc
ttcacccaagggcgcccacctaatatcacgttgagggtcatgaccagaattgagcaacct
tttgtgaccttcactaagataaaagatggcgctgaacccatcgggaacgacagatttgag
ggtttttgcgtggatctcctggaacatattgcagagcttgttgggttcaattatgttatt
gagttgattccagacaataattatggggctttggatctgtcaaccggagaatggaacgga
ttggttcgagagctaatgtacgataatgccgatttggccatgggtgccatgaccattaac
tttgcccgtgaggctgtgattgatttcactaaacctttcatgaatctgggcatctctatt
ttgtacaaaatcccaagcggaaaacctacccgcctcttctcttttatgaatcccttggct
gttgaaatctggctttacgttttagctgcgtacatgctcgtgtctttcactctattcgtt
atggcaagattttcaccttacgaatggaacaatccacatccatgcatcactgaaaacgag
gtgaaggaaaaccaattttcggtatccaattcgttctggttcatcactggaacctttttg
agacaggggtctggcttgaatccaaaagctgcttcgaccaggattgtgggagcgatttgg
tggttcttcaccttgatcataatttcttcatacactgctaatttggccgcttttctcaca
gtggaacgtatgattactcccattgaaaatgatgaagatttagctaagcaaagtgaaatt
gcttatggaactttgagcggtggctccaccatgactttcttcagggattctaaaattgat
gtctataaaaagatgtggaatttcatggagaatcatcagccctcagtgtttgtcaccaat
tatgatgagggcattagtcgagtgaaaagaggtgggtatgcctttctcatggaaagcacc
atgctcgattatgtcgtccaaagggattgcaatctcacccaaatcgggggcttgctggac
tccaaaggctatggaattgctactcccaagggctccaaatggcgggatcacctatcactg
gccatcctcgaacttcaagagaaaggaaccattcaaatgctttacaacaaatggtggaaa
aacaccggtgacgtgtgtacacgacaagataaaagcaaagattcaaaggccaatcccttg
agtgtgaaaaacattggaggagtctttgtggtccttctatgtggcctttctcttgccatc
gtggtcgcagttttggagttctgttggaactcgcgaaagaatgcccaaagtgaccaccaa
agtttatgttcagaaatggccgaggaacttcgctttgccatgagatgtcggggagcccga
caaaagcccgctcttcgaagaagttgttcccgatgctcgcctgaaaacacttacgtcccc
tcgtctttggagttttccaaggctctcaatggaagtgagaagactgtttattccggagct
tttggcttcaatgacatgattgctcacgctcatggcgaaggcgaatctttgaccaatgga
caagctcatcatgaccatatctatgactga
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