Tigriopus californicus (tidepool copepod): 131892164
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Entry
131892164 CDS
T09700
Name
(RefSeq) brahma-associated protein of 60 kDa-like
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131892164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131892164
03036 Chromosome and associated proteins [BR:
tcf03036
]
131892164
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131892164
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131892164
PBAF complex
131892164
GBAF(ncBAF) complex
131892164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
131892164
NCBI-ProteinID:
XP_059097922
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All DBs
Position
12:1278425..1285475
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AA seq
576 aa
AA seq
DB search
MTTRPLECRTFCVLVFWNTVHNKVRNVEKRWLPIIVVNCVTCEESERNPLIRHFCLFNPR
YECGQVGLWCAGGPAATAPCGERCGSARVRPPPGPPPPGYASPRAGQPSGGGAGVSGPPG
SAGRGPMAGPQMVALPHRGTPGTPGTPGGPMGPPPPGSKRPAPPHGGGHPGGPMPNPAKS
AKKKKKLADKILPQKVRELVPESQAYMDLLAFERKLDSTIMRKRLDIQEALKRPMKQKRK
LRIFISNTAFPAKESGENGEEPTTASWELRVEGRLIDEDKKADPTKSKRKFSSFFKSLVI
ELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDKNVRCTILLLLDYQPLQFKLDQRLA
RLLGVHTQTRPVIISALWQYIKTHKLQDAHEREFVKCDPYLRQIFQTERMKFAEIPQRLN
PLLHPPDPIVINHLITVEDLRGPDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIQG
LDSKIHETVDTINSMKTNREFFLSFAKDPQLFINKWLMSQSRDLKTMTDVVGNPEEERHT
DFYYQPWAQEAVCRYFYQKIQQKRAELDSALGIRAS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcgccctctagagtgcagaaccttttgtgttcttgttttctggaacactgtt
cataacaaagtcagaaacgtagagaagcgttggttgccgatcattgttgtgaactgtgtg
acttgtgaagagagtgagaggaatccacttattcgccacttctgcctctttaatccacgt
tatgaatgcgggcaagttggcctttggtgcgccggggggcccgccgcaaccgcgccctgt
ggggagcggtgtggctccgcccgggttcgtccgccaccgggcccgccgccgccgggctac
gctagtccgcgcgccggtcagccttcgggcggcggcgctggggtgagtggcccaccgggc
agtgctggacgaggtcccatggctggcccgcaaatggtagcgttgccgcacaggggcacg
ccgggcacaccgggcacgccgggaggcccaatgggtcctcctcctcccggttccaaacgc
ccagctccgccccatgggggcgggcacccggggggtcccatgcccaatcccgccaaaagc
gccaagaagaagaagaaactggccgacaagatcttgccccaaaaagtccgagaactcgtg
cccgaatctcaggcgtacatggatctactggcatttgagcgcaaattggactcgaccatc
atgcggaaacgtctggacatccaagaggccttgaagcggcccatgaagcaaaagcgcaaa
ctccgcatcttcatctccaacacggcttttcccgccaaagaaagcggcgagaacggcgaa
gagcccaccacagcctcatgggaactgcgtgtcgaaggccgcctcattgacgaggacaag
aaggctgatccgaccaagagcaagcggaagttctcgtcgttcttcaagtcgttggtgatc
gagctggacaaggacttgtatggaccggacaatcatttggtggaatggcaccgaacgccc
actactcaggagaccgatgggtttcaggtgaagaggcctggtgacaagaacgtgcgctgc
acgatcctcctccttttggactaccaaccccttcagttcaagctggaccagcgtttggca
cgacttctgggcgtgcacactcagacccgaccggtcattatctccgccctgtggcagtac
atcaagacccacaaactccaagacgcgcatgagcgtgagtttgtcaagtgcgatccgtac
cttcgacaaatctttcaaaccgaacggatgaagtttgccgagatccctcagcgactcaat
ccgttgctccatcctccagatccgattgtgatcaaccatctgatcacggtggaggatttg
cgcggtccggatcagaagaagacggcatgctacgacatcgatgtggaagtggacgacacg
ctaaagacccagatgaacagcttcctgctctccacggcgtctcagcaggagatccaaggc
ttggactccaagatccacgagaccgtggacacgatcaactccatgaagaccaatcgcgag
ttcttcctcagctttgccaaggacccacaactattcatcaacaaatggctcatgtcgcaa
tccagagatttgaagaccatgacggatgtggtgggcaatccagaggaggagcgtcacacc
gacttctactaccaaccttgggcacaagaggcggtttgtcggtacttttaccagaagatc
caacagaagcgtgccgagctcgactcggccttaggcattcgagcctcttaa
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