Tigriopus californicus (tidepool copepod): 131892338
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Entry
131892338 CDS
T09700
Name
(RefSeq) fatty acid CoA ligase Acsl3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00061
Fatty acid biosynthesis
tcf00071
Fatty acid degradation
tcf01100
Metabolic pathways
tcf01212
Fatty acid metabolism
tcf04146
Peroxisome
Module
tcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131892338
00071 Fatty acid degradation
131892338
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131892338
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tcf01004
]
131892338
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131892338
Enzymes [BR:
tcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131892338
Lipid biosynthesis proteins [BR:
tcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131892338
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
131892338
Exosomal proteins of breast cancer cells
131892338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
131892338
NCBI-ProteinID:
XP_059098131
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Position
12:complement(8429184..8440400)
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AA seq
713 aa
AA seq
DB search
MAVIDLMLGVVRAVVFVYDVLTYPVYTFIQQPWEAKTRQNLGVVHQTERNAEAIAFRRDK
GASEIYQEIIVRNGVDTVSKAFNYSVKKFGQKECLGIREVHGIEDEVQQNGKVFQKLSLG
DYQWLSYNEVQTQAHAFGRGLRDLGLKPGSKISMFAETRAEWMIACLGAFSQNIHICTVY
TNLGNDAVIHALNETEVTVVVTSHELLPKFSMILPSCPKLSHVIYMEDPVQTTPTDKFKP
GVQILPFRGLVSVGRDKVESIPTEEPTPDDTAIIMYTSGSTGTPKGVVLTHRNLVATMSC
LMFMLNPKDDIYIAYLPLAHVLELLSENTMMLFGIRVGYSSPNTMTDMSTKIRKGTKGDA
SVLQPTMMCAVPLILDRIYKNILDSVSKRGPSFQKVFNFCYEYKRYWMKRGRGTPICDKI
VFNKIRSLLGGKMDFVLVGGAPLCEKTHDFIRTCLGVTVVQGYSLTESGCTGTVMESRDL
STGTVGRPMTGLEVKLINWEEGNYNVSDTPRPRGEICLSGTPVAKGYFKVDSNTKDSFFV
DNQGKRWFKTGDVGEFDSQGQLRIIDRKKDLVKLQLGEYVSLGKVEAQLKTHPLVENICV
YGDPYKQTTVALVVPSKVHLEALGQRLGKTESFEQLCTDSDVLEAVLKDLSTTGLSQGLE
KFEIPSALTLCPDPWTPESGLITAAFKLKRKVVQRQFQDRINQMYSQKRPSSP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgattgacttgatgctgggggtggtgcgggcggtggtgttcgtgtacgatgtg
ctcacctatcccgtgtacacattcatccaacagccttgggaggccaaaacgcgccagaac
ttgggagtggtccatcaaaccgagaggaatgccgaggccatcgccttcaggcgcgataaa
ggggcgagtgagatttaccaggagattatcgtccgcaatggtgtggacacagtcagcaag
gccttcaactactccgtcaagaagttcggccaaaaggagtgtttgggcatccgagaagtc
catgggattgaagatgaggttcaacagaatggcaaggtgttccagaagctctctttaggg
gattaccaatggctctcgtacaacgaggtgcagacacaagctcacgcttttggtcggggt
ttgcgcgatctgggcctgaaacccggatccaagatctcgatgttcgccgagacgcgggcc
gagtggatgatcgcgtgcttgggcgccttcagtcagaacattcacatctgcacggtctac
accaatttgggcaacgatgctgttatccatgctctcaacgagaccgaggtgacggtggtg
gtgacctcgcacgagttgctgcccaagttcagcatgatcctgcctagttgtccaaagctc
tcgcacgtcatctacatggaggacccggtccagaccacgcccacggacaagttcaagccc
ggcgtgcagatcctccccttccgaggtctcgtgtccgtgggccgagacaaggtcgagtcc
atccccacggaggagcccactccggacgacacggccatcatcatgtacacctcaggctca
acgggcacacccaagggcgtggtgctgacccatcggaacctggtggccaccatgagctgt
ctgatgttcatgctgaaccccaaggacgacatctacattgcgtatttaccattggcccac
gttttggagctgctctccgagaacaccatgatgctcttcggcatccgtgtaggctactcc
tcgcccaataccatgaccgacatgtccaccaaaattcgcaaaggcaccaaaggagacgcc
tctgtgctccaacccactatgatgtgtgccgtccctctcatcttggataggatctacaag
aatattttggactcagtgagcaagcgaggcccgagctttcagaaggtattcaatttctgt
tacgaatacaagcggtactggatgaagcgcgggcgaggtacgcccatttgtgataagatc
gtgtttaacaagatccgaagcctcttgggtggaaagatggacttcgttctcgtgggcgga
gctcccttgtgtgagaaaactcacgacttcatccgcacttgtctaggcgtcaccgttgta
cagggctactcgctcactgaatcgggttgtacgggcaccgtcatggagagccgtgatctg
tccacgggcacggtaggccggccaatgaccggcctagaggtcaagctcatcaactgggag
gagggcaactacaacgtctcggatacgccacgaccccgtggggagatctgtctgagtggc
acgccagtggctaagggttacttcaaagtcgactccaataccaaagactcattcttcgta
gacaaccagggtaaacgttggttcaagaccggcgatgtcggagagttcgacagtcaagga
caattgcgcataattgatcggaagaaagatttggtgaagcttcaactcggcgaatacgtg
tctctgggcaaagttgaggctcagctgaaaactcatcctttggttgagaacatttgcgtc
tacggagatccttataaacagaccacagtagcattggttgtgcccagtaaggtgcattta
gaggcactcgggcaaagattgggcaaaacggaatccttcgagcaattgtgcacggattcg
gatgtgctggaggccgtactcaaggacctgagcactacaggtctgtcccaaggcctggag
aagttcgagatcccttcggccttgaccctgtgtccagatccttggactccagaatcggga
ctcatcacggccgcattcaagttgaaacgcaaggtggttcagcggcaattccaagaccgc
atcaatcaaatgtatagccagaagcggccatcctcaccctga
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