Tigriopus californicus (tidepool copepod): 131892409
Help
Entry
131892409 CDS
T09700
Name
(RefSeq) calcium-activated potassium channel slowpoke-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131892409
Ion channels [BR:
tcf04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
131892409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
Lig_chan
Motif
Other DBs
NCBI-GeneID:
131892409
NCBI-ProteinID:
XP_059098253
LinkDB
All DBs
Position
12:5316097..5338566
Genome browser
AA seq
1090 aa
AA seq
DB search
MAVNETAQVILKELSDKCMQDRQAGFYVAVSGATFFAALIIVLVPRILSAPCVARKQKNI
DEKLLVEPSMYINVQNWAGDLISGNTTTGRILVVFTFVCSIVAMGLYIYDTHEFLDLERC
VNWKDAITLQIDFALSIVFIFYFIIRFIATDDKVMFMISLESLVDFFTIPPVYLSVYYDR
AWLGLRFLRALIFMNLPDVLVYVRVINLSSEIRLTKLCSIFLASVMACAGLCFFLENSGD
PWRNYENRHDPYLGYGDCLYYMFITMSTVGYGDIFCVTDWGRIFIIFYVCQALVMFANFL
PEIVQLVGNRPRFAGEYEPDGRQFIVVAGNVNYESVQTFLGDFFHPARDDVDVEVVFLNK
LEPDLEFEGLLKREHTRVQYFKGSMLNAYDLQRVRCNQAAACLVLANKFSEEPDVEDAAN
IMRVISLKNYCEDTRVIIQLMMYHNKGYLLNIPGWDWRRDDQAVCLNELKLGFIAQSCLA
PGFSTLVSNLVIISSPDLNEVLRPSSHAGDVPKWKRDYFTACNKVILAETLSPTFVGLQF
KQVAEICYTQLNLLLLAIEARKYEGGEIYINPKDKVINPNAIGLFMTDSADSAKRAWFYC
RKCHANIKSETEVTKCDCKRTAVRHLEKGGRSGTIHRRKNKHNIVEEILDFEGEETADGT
KKRNKLPRTATSIDVDGVEQSKMQYDSTGMYHWCPSRGIEECLMDRQDAAMTVLQDHVIV
AVFANDDSPLIGLRNLVMPLRASNIHFNELLQVVIVGNVDYLRREWRLLQNLPKINVLNG
SPLSRADLRAVKVDMCRMCVILSAKIPSRIEPVLADKEVILTALNVKAMTFVDEDDSLDE
SDKLNRRNSILGDLMEAEGPVSRAVPIIVDLAFSTNVRFLDDHELHLDDVELYKTLPYAA
GQALARGILDSLMSTTYFNASALRLIRSWVTGGATIELELALAEGAGLRGGYTTPSTLKS
RDRFRVAQVALQGSVFSKIAEEGYPFGVLFAEASSKYGMLCIGIYRLVVNPRASLEACES
DSDSDSDMTRVKKKRRPAQVKGEDPGDTTHDASLRIVISAPNKNMPLEVSDMAFMLVQYQ
LPVEDLRAPQ
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaacgagacggctcaggtcatcctgaaggagctcagtgacaaatgcatgcag
gatcgacaagcgggcttctacgtggccgtgtccggggccacgttcttcgccgccctcatc
attgtcttagtgcctcgaatcctgtcggccccttgtgtggcccgcaagcagaagaacatt
gacgaaaagcttctcgtggagccgtccatgtacattaatgtgcaaaactgggccggagat
ctaatctccggcaacaccaccacgggaaggatcctcgtggtgttcacctttgtatgctcc
attgtggccatgggcctttacatctacgatactcacgagttcctggatttggagcgatgc
gtcaactggaaagatgccatcactctccagatcgacttcgctctcagcattgtgtttatc
ttctactttatcattcgcttcatcgcaacagacgacaaggtcatgttcatgatttcattg
gaaagtctcgtcgacttcttcaccattcctcctgtttatctttctgtgtactatgaccga
gcttggttgggccttcgatttcttcgcgccctgattttcatgaatctccccgatgttttg
gtatatgtccgtgtcatcaatttgtccagtgagattcgtctcaccaaactctgctccatc
ttccttgcctctgtcatggcttgtgcgggattgtgttttttccttgagaactcgggggat
ccctggagaaactacgaaaacagacacgatccctatcttggatacggtgactgtctctac
tacatgtttatcaccatgtccacggttggctatggtgatatattttgtgtcactgattgg
ggccgaatctttatcatcttttacgtgtgccaagctttggtgatgtttgccaatttcctc
ccggagatcgttcaacttgtagggaacagaccaaggtttgctggggaatacgagccggat
ggtcggcaattcattgttgtggccggaaacgtcaactacgaaagtgtgcagaccttcttg
ggcgatttctttcatccagcacgggatgacgtggatgtggaggtcgtgtttttgaacaag
ctagagcccgacctggaattcgagggtctgctgaagagggaacatactcgcgtgcaatac
ttcaagggatcaatgctcaatgcttatgaccttcagagagtacggtgtaaccaagcggct
gcttgtctagtgctggccaataaattctcagaggagccagatgtggaagacgccgccaac
atcatgcgagtgatcagtctcaagaactattgtgaggacaccagggtcatcattcaactc
atgatgtaccacaacaaaggctacctactcaacattccaggatgggattggcgtcgtgat
gatcaggcagtgtgtctaaatgaactgaagttgggcttcatcgcccaatcttgtctggct
cccggtttctccacgttggtatcgaatttggtcataatcagctctccagacctgaatgaa
gtgctaagaccgtcaagccatgcaggagacgtccctaaatggaaacgtgattactttacc
gcatgcaacaaggtgatcttggcagaaaccctctcaccgacctttgttggccttcaattc
aaacaggtggctgagatctgttacacacaactgaacctccttttactcgccattgaggcc
aggaaatatgaaggaggcgagatttacatcaatcccaaggacaaagtgatcaacccaaat
gcaatcggtcttttcatgacggactcggcagattcagctaaacgggcttggttttattgc
cggaaatgtcatgcaaacatcaaatccgagaccgaagtcaccaaatgcgactgcaagcgg
accgctgtcaggcatttggagaaaggaggacgaagtggcaccattcaccgccgcaagaac
aagcacaatatagttgaagagatcctggatttcgaaggcgaagagactgcagatggaaca
aagaagcggaacaaattgcctagaacagccacatcaatcgacgtcgacggggttgagcaa
agtaaaatgcagtacgattccacaggcatgtaccattggtgtccaagtagaggcattgag
gagtgtctcatggaccgccaagacgcagcaatgacagttctccaggaccacgtgattgtg
gccgtgtttgccaacgacgacagtcctctgattggattgcgaaatctggtgatgccgttg
cgagcgtccaacattcatttcaacgaattgctccaggttgtgattgttgggaatgtggat
tatctcagaagagaatggaggctgttgcagaatctccccaagatcaacgttctcaatggg
tctcctctaagcagggctgacttacgggccgtgaaagttgacatgtgccgcatgtgtgtg
atcctctcagccaagattccgtccagaatagagccggttctggccgacaaagaggttata
ctcacagccttgaatgtcaaggccatgacctttgttgatgaagacgattccttggacgag
tcggacaaactgaaccggaggaactcaatattgggtgacctaatggaagccgaggggcct
gtttccagagccgtgcccattatcgtggacctggccttctcaaccaatgtcagatttttg
gatgatcatgaacttcatctagatgacgtagagctttacaagaccctaccgtatgctgcg
ggacaagctttggcgcgaggtatcctggattccctcatgtccacaacgtacttcaatgct
tcggccctgcgactgatccgttcttgggtgacaggaggcgccaccatcgaactggagctg
gctctagctgagggggcgggtctaaggggtggctataccactccatcaacattgaagtcc
cgggatcgcttcagagtggctcaagtggctctacaagggagtgtgtttagtaaaattgct
gaggaaggttatccgtttggggttttgtttgcggaggcgtcgtcaaagtatggcatgctc
tgcatcggaatttacagattggtggtcaatccaagggcgtctttggaggcttgtgaatcc
gattcagattcggatagcgatatgacacgcgtgaagaaaaaacgcagaccagctcaagtc
aaaggtgaggatcctggagacacaacccatgatgcttccctccggattgtgatatcagcg
ccaaacaagaacatgccattggaggtgtccgatatggccttcatgctggtccagtatcag
ctgcctgtggaggatctcagagcacctcaatag
DBGET
integrated database retrieval system
