Tigriopus californicus (tidepool copepod): 131892595
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Entry
131892595 CDS
T09700
Name
(RefSeq) homeobox protein orthopedia-like
KO
K09331
short stature homeobox protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131892595
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
131892595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
Motif
Other DBs
NCBI-GeneID:
131892595
NCBI-ProteinID:
XP_059098390
LinkDB
All DBs
Position
2:complement(12092371..12101407)
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AA seq
429 aa
AA seq
DB search
MFQCSDMDVMSEVNESEAMDLSKMEEDSIKIEEVDVETVEETGDLDLPDTTSNSNDPPSG
LSSEDNIPSSTSHQETSEGGINQDGSTSKSQRTSSCSSLGLSSSSSSSQNNKPRRSRTNF
TLEQLNELERLFDETHYPDAFMREELSDRLGLSEARVQVWFQNRRAKCRKHESQHYKGSS
SAPTPIGNINLPVSGSSQSLVSMGTPISAVPGSRLAGLLRSSTGPLPPPSPALGHGSKNS
NGSSTPPLLSPLSAGPNISNNNNNNNSPHHSNPDAVDLSRGTPLPKATFTERLKEHALRN
FDSHSRALLNAQQYAAVAVAALKSSNNPSPFLSSFSNSLLVSSLLQSSKSQSTASDTPLF
PPFPAALFSSPHTSMASLPFSSALPSMSLGPHNGSLPSLDPFKSKSSSIADLRLKAKRHQ
EALGISESD
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgttccagtgttccgacatggacgtgatgagtgaagtgaacgaaagtgaggccatggac
ttgagcaagatggaggaagactccatcaaaattgaagaagtggatgtggagacagtggag
gagaccggggacttggacctgccagataccacctctaattctaatgatcccccttctggc
ctgtcgagtgaggataatattccttcaagcacttcacatcaggagacttcggagggaggt
ataaatcaagatgggtccaccagcaaatcccaacgaacctcgtcgtgctcctcccttggg
ctgtcttcctcgtcttcctcatcccagaacaacaaacccagacggagcagaaccaatttc
actttagagcaattgaacgaattggagagactcttcgacgaaacccattatccggacgcc
ttcatgagagaagaactgagtgaccgattgggcctcagtgaagcacgagttcaggtttgg
ttccaaaatcgaagagctaaatgtcgaaaacacgagagccagcattataagggatcctca
tccgctccaaccccaattggcaacattaatcttccggtgtcagggtcaagtcagagctta
gttagcatgggtacgcccatatccgccgtaccaggaagtcggctggcgggcttgcttcga
tcctcaaccggacctctgcctccaccttctccagcattgggtcatggttcgaagaattct
aatgggtcttcaacacctccattgttgtctcctttgagtgcgggccctaatatcagtaat
aacaacaataacaacaatagtcctcaccattcaaatccggacgccgtcgatctttcacgt
ggaacccctcttcccaaagctacgttcacagagagacttaaagaacatgctttgaggaac
ttcgatagtcactcccgagctcttctgaacgcccaacagtacgcggccgtggcagtagcg
gctctaaagagttccaacaacccttccccgttcctatccagcttcagtaattccttacta
gttagctccttgcttcagagctctaaatctcaatccacggccagtgacacgccattgttt
ccgccatttccggcggctttgttttctagtccacatacttctatggctagtctacctttt
tcctcggcgctcccatcaatgtccctgggcccacataacggatctcttccttctctggac
ccatttaaatccaaatcttcgagcatcgcagacttgcggctcaaagctaaacgacatcag
gaggccttgggcatctcggaaagcgattga
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