Tigriopus californicus (tidepool copepod): 131892715
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Entry
131892715 CDS
T09700
Name
(RefSeq) contactin-like
Organism
tcf
Tigriopus californicus (tidepool copepod)
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Pur_ac_phosph_N
Ig_5
Izumo-Ig
Ig_4
UL45
Lectin_C
NDNF
Motif
Other DBs
NCBI-GeneID:
131892715
NCBI-ProteinID:
XP_059098531
LinkDB
All DBs
Position
2:3912865..3919252
Genome browser
AA seq
1593 aa
AA seq
DB search
MRLRVTWATLALVIGIGLIPIVISQREYEDLESPEDIDYTYNYDGDPSDDAQQERDRIRN
KNRDPNPFRSNVRNPNGGFRARDPNSGGFRVGEDDIFDDDRPAGGFRRRPDFRGRDGDFS
KVDSGGFNSIATSTRSPFRGFQPSTIDPRFSPVRTTTLAPTYTTNLPIKTTDRFGQNRFG
GGFQPFSTTTEDPFRRPDDPFRSSSDSANRFRTSTIRSNDPFNKGTDRNDPYDPYGPDLE
DANDIQNNEVGNIYQPINPFGLPPLRTRPQVDEFGNPLEDIQSVDTTRFELGEGVEANEV
KCPRNWIRFKESCYKFTRSPIKRWDDARMNCQAYRHQDQDHADLASVDDLDEHRFLVDHL
NLIDPQHRRWYISTRQEDQNRWVNLGDGSQMLNLQQYFLRPEEWGESSFTDYKKDYLVYS
FSYAESRWGFQPVFGHEEYLYICEMPIEEVTYLMTDERTHEYGLAIGDPRFYPMGPYFIR
QPNQTVFNVGRRKVINDVSLLCIATGWPTPTYRWFKEGYKNDTLVSEEVDVLKDRRVTIS
GGQLIINNPNAISDRGKYFCTAHNQFGTIRSRSVSIAFGFIGEFILRRSKEVGSENWGKA
ISCDPPQYFPDVKFYWARDYFPNFVEEDRRVMVSYDGYIYFSALEKIDRGNYSCSVQSSV
SDNGRNGPFFELEVSPHPNYQQLRFPQNFPKAFPEAPVAGEDVRLECIAFGYPVPHYNWT
RRNADIPDGAIVTNYNRVLILPRVRVEDQGEYVCRAHNDKVSITGTVTLSIQSRPVFTIS
IGDMHVDERDDLTWTCEAFGIPDVLYEWVKNGEVLRTNDSDLAPEDRGRYEIRDNILIIR
QVRKDRDEGMYQCRAYNELDSRYSSGQLRVLSFPPTFAKYPLEPKTFAAEGGNVTLRCQP
EGAPQPKFTWRKDGNKIGSSGKYIIYDNGNLFINRVNVADTGTYTCEAANEYGKAESTGK
LIVKLGPTFASGVKPNPRVIAASGETVELRCRAEADQFLDMAYSWTLNGLFIRFFEDEEQ
ERILTLKNAPGNRVDGQSWFTAFSDHERLLQSSSWFQGNYFQYTKGTGDFNKFRRGYLDG
YLKIVNVSYAEAGYYECMVDTAVGRIYATSEMIVHGPPGPPGGVSALSLTSRSGTVVWTD
GAIYGRQILYYRVDGRTRSNMTWHTLADRVLAEEIQHLGARAKIHGRRQIILRNKLSPFA
AYQFRVAAYNDLGLGEFSEASPSYNTLPDKPLKAPSNLRGGGGKTGDLTIMWDVLPKHEQ
NAPGIYYRIYYRRVGVDADRDFQQKTLKNLGNIGLYVVRIQKKYYYTTYEVKVQAFNDMC
EEPECSGPISEPVTIYSAEDMPQVAPTQVGARPFNSTAINVTWIPIPDVREKVRGKLIGY
RIKYWREDLQEIIESQYLLSRSIEPHALIIGLQPNSYYWVRVMAYNAAGPGPESERFLER
TFKLRPQKPPTAVQVYGLNPSTIRVTWRYVAPSVEEEPLTGYKVRIWESDRDVSEANDTV
IYIGNKLEATVTDLAPAKTYYLRVLAFSQGGEGKMSSPAWQFQMGDPDALNLAPVVSHSV
LISVLLPVVIALLNNLWFESRTSRTHPKIGSGT
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgagactccgagtgacttgggccacattggccttggtgattgggatcggactgattccc
attgtgatatctcagcgggagtacgaagaccttgaatcaccggaggatatagattatacc
tacaactacgacggtgatccctcggacgatgctcaacaggaacgggaccggatccgcaat
aagaatcgagatccaaatccatttcgcagcaacgttcgaaatccaaatggaggatttcgg
gcgagagatcccaactctggaggattccgggtgggcgaagatgacatttttgacgatgac
cggccggccggagggttccgtcgtaggccggactttcggggacgtgatggcgattttagc
aaggttgatagtgggggatttaacagtatcgccacttccactagaagtccatttcgagga
tttcaacccagcactattgaccccagattttctccggtgagaaccacaactctggccccg
acatacaccaccaacttgcctatcaaaacaactgaccgatttggccaaaatcgatttggt
gggggcttccaaccattctccaccaccactgaagacccattccggcggccagatgaccca
tttcgaagttcctcggactcggccaatcggttccgaacttcaaccattcgatcaaacgat
ccattcaacaaaggcactgatcgaaatgatccgtacgacccgtatggtccggatctggaa
gacgccaacgatatccaaaacaacgaggtggggaacatttatcagcccataaatcccttc
ggactgccccctttgagaactcgtccccaagtagacgagtttggcaatcctttggaagat
atccaatctgtggataccacaagatttgagttaggcgaaggtgtggaggccaatgaagtg
aaatgtcctcggaactggatccgtttcaaagagagttgctacaaattcacccgcagtccc
attaaacgttgggatgatgctcgaatgaattgccaggcttaccgacaccaagatcaggat
cacgcagatctggccagtgtggacgatctggatgagcatcgtttccttgtcgaccactta
aacttgatcgacccccaacatcggcgatggtacatttcaacgaggcaggaggatcagaat
cggtgggtgaatcttggagatggctctcagatgctgaacttgcaacaatactttctccga
ccagaagagtggggcgaatcttctttcactgattataaaaaggattacttggtgtattcg
ttttcttacgccgaaagtcgttggggattccagcccgtttttggccatgaggagtacctc
tacatttgtgaaatgcccattgaggaagttacgtatctgatgacagatgagagaacccac
gaatatggcctagccattggggatccgcggttttatcccatgggaccttatttcattcgt
cagcccaaccaaaccgtgttcaatgtgggacgaaggaaagtcattaatgacgtctctttg
ttgtgcattgccacaggatggcctactccaacctatcgatggtttaaggagggctacaag
aatgacacacttgtttccgaagaggttgacgtgctcaaggatcgcagggtgacgatatcg
ggaggacaactcatcatcaataatcccaatgccatctcggaccgagggaaatacttttgc
acggctcacaaccagtttggaactatccgctctcgttctgtgtccatagcttttggattc
attggcgagttcattctaagacgaagcaaagaggttggcagcgaaaattgggggaaagcc
atttcatgtgatccacctcaatacttccccgacgtcaaattctattgggccagagactac
ttccccaactttgtggaggaggatcgccgagtcatggtttcctacgatggctacatttac
ttctcagctttggaaaagattgatcgaggcaattactcatgctcagtacagagctcagtg
tccgataatggacggaacggacccttctttgaactggaagttagcccacatccaaattat
cagcaactccggttcccgcagaatttccccaaagcttttccagaagctcccgtagctgga
gaagatgtcaggctcgagtgcattgcctttggatatcccgttccccactacaattggaca
cgaaggaacgcagatatcccggacggagcaatcgtgacaaactacaatcgggtgttgata
ctgcctagagttcgagtggaagatcagggcgaatatgtttgtcgggcccacaatgacaag
gtgtcaatcactggaaccgtgaccttgagtattcaatctagacctgttttcacaatctca
attggagacatgcacgtggatgaaagggacgatttgacgtggacttgtgaggcctttggt
atcccggacgtactctacgaatgggttaagaatggtgaagtgttgaggaccaatgactca
gatttggctcccgaggatagaggacgatacgagatcagagacaatatactcatcataaga
caggtccggaaagatcgggatgagggcatgtaccaatgtcgagcatataacgagcttgat
tcaagatattcgtccggtcagttgcgagtcttgtctttccctccgacctttgccaagtat
cctttagagccaaagacttttgctgccgaaggtggcaatgtaactctgcggtgccaacca
gaaggagctcctcagcctaagtttacttggcgaaaggatggcaacaagattggatccagt
ggcaagtacatcatctacgacaatggcaatctattcatcaatcgagtcaatgtggcggat
accggcacttacacgtgtgaagcggccaatgagtacggaaaggccgagagcactggtaag
ctgattgtcaaactaggcccaacctttgcctccggggtgaagcccaatcccagagtcatt
gccgcatccggagaaaccgtggagcttcgttgccgagctgaggctgatcagttcttggac
atggcctacagttggaccctgaatgggttgtttatccgatttttcgaagacgaagagcag
gagcgaatcttgacattgaaaaatgcacctggaaatcgtgtggacggccaatcttggttc
acagctttcagcgatcacgaacgattactccagtcaagttcgtggtttcaaggcaattat
ttccagtacacaaaaggaaccggggatttcaacaaattccgacgtggttatttggatggc
tatttgaaaatcgtcaacgtatcttatgccgaggccggatattatgagtgcatggtagat
acagccgttggccggatctacgccacctctgagatgattgtccatgggcctccgggaccg
ccaggcggcgtctccgccttatcgttgacttcaagatcgggaactgttgtttggaccgat
ggagccatttacgggagacagattctttactaccgagtggatggccgaactcgctcaaat
atgacttggcacaccttggctgatcgcgtgctagccgaggaaatccagcacttgggagca
agagctaagattcatggcaggaggcagatcattttgaggaacaagctatctccatttgca
gcctaccaattccgagtggccgcttacaacgaccttggccttggggaattctccgaggcc
tctccttcttacaacactttgccagataagcctttgaaagcacccagcaatctccgaggg
ggcggaggcaagacaggggatttgaccattatgtgggatgtcttgcctaagcatgagcaa
aacgctccagggatctattaccgaatctattataggcgtgttggcgtggatgcggatcgg
gatttccagcaaaagactctcaagaatctgggcaacattggcttatatgtggtgcggatc
cagaagaaatattactacacaacatacgaagtgaaggtccaagcgttcaatgacatgtgt
gaagaacccgagtgctcaggccctatttccgaacctgtcactatttactcggctgaagat
atgcctcaagtggctcccacccaagtgggtgctcgtcctttcaattcaaccgccatcaac
gtaacttggatccctattccggatgttcgggagaaggttcgaggcaagctcatcggatat
cgcatcaagtattggcgggaagatctacaagaaatcattgaatcacagtacttgctcagt
cgatccatcgaaccccacgccttgatcattggcctccaacccaactcgtattattgggtg
agagtgatggcctacaatgcggccggacccggacccgaatcggaacgtttcctcgaaaga
accttcaagcttcggccccagaaaccgcccacggcagtccaagtgtacgggcttaatccc
tccactatacgggtgacatggcgatatgttgctccctctgtggaagaagaaccgttgacc
gggtacaaggtgaggatatgggaatcagatcgtgatgtcagcgaggccaatgacaccgtc
atctacattggaaataagctcgaagctactgtcaccgatctcgcaccagcaaagacctac
tacttgcgcgtgttggctttttcccagggtggcgaggggaaaatgtcttcaccggcttgg
caatttcaaatgggagatccggacgctctcaatctcgctccagtcgtctcccatagtgtg
ctcatatccgtgcttcttccagttgtcatcgcattattgaacaatctttggttcgagtct
cggacttcgagaactcatcccaaaatcgggtctggcacgtga
DBGET
integrated database retrieval system
