Tigriopus californicus (tidepool copepod): 131892756
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Entry
131892756 CDS
T09700
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131892756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131892756
03036 Chromosome and associated proteins [BR:
tcf03036
]
131892756
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131892756
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131892756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
SelB-wing_3
Motif
Other DBs
NCBI-GeneID:
131892756
NCBI-ProteinID:
XP_059098579
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Position
2:complement(2292647..2296003)
Genome browser
AA seq
701 aa
AA seq
DB search
MILPSVSGGGGSAPPPPTQVTVPQSGGALGVAWQRGNALTLFPTRFPPLDRSAGGGAAGS
SGGQTQPLTLVSWERSLFEPVFRKLINESAQIFIQLQRGVAPGCRDVGRDFYLQISRQYR
SVIRDCQELLDGAGADPNTMAVDGTGDTPSVAQSELLYKLELIWNLVEVLVIETRPVSKS
QPDIFLERTHAWISLIPDGIILPQLVQWCCLHFPEADQKARHVLTENPEQPEMHAHFWDA
LLLFLIQGRTEQAQKLLRLHSDFGNTEAFGSLDELIRKMPRYSPQLMMSSVDFDFRFKHW
QKEVRSRLDEGDFASSHELHRLALVLSGSEEALSEMADKCETWYQWMIGKLLFTQPDVKS
YDLSYHAQQAINKFGGLSGMTSLDSILLAVMESDIAQVINELSSTLDNHWFPAHLLDLLY
HTDPSAFETNPEDAIAAANACGSLREYLILEYGTCLMSHRSLWQVGALYMDHCPTQGKYR
LELLLERIPLDTETKANKIMAMANERGMYSIVGSTCRVMGMQALREKRIGSAMAWALRSQ
DAQFTTFLADQLLLQYCEEGSFTSADLLDHLGSSMVLSDRLTFLAKYREFHRLCSEEQDF
KAAASLLHSLMWSRMAPKYFWVTLLIDALPFVSCQDEVLLSSEQTYELLHCLQEISKDES
LPKKQKLLLEEHEPQIRLELSRNLAIALMEEGDEQAITLAR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgattctgcccagtgtgagcggtggaggtggctccgccccacccccgcccacccaagtg
accgtgccgcaatcgggtggcgctttgggcgtggcctggcaacgtggtaacgccttgacc
cttttccccacccgattcccgcccctggatcggtcggcggggggtggggctgctgggagt
tccgggggtcaaactcagcctttgacgttggtttcctgggagcgctctttgtttgaaccc
gttttccgtaaactcattaacgaatccgcccagatcttcattcaactgcaaagaggcgtg
gcacccggttgccgagatgtgggtcgcgatttctacctgcagatatctcgccaatatcgc
tcagtgattcgggattgtcaggagcttttggatggggccggagctgacccgaataccatg
gccgtggatgggaccggggatactccatccgtggctcaatccgagcttctgtacaagctc
gaactcatctggaatctcgtggaagtgctggtcatcgaaacccggccagtcagtaaaagt
cagcccgacattttcttggaacggactcacgcatggatctctctgattccagatgggatc
atcctgccgcaattggttcaatggtgttgcttgcattttcccgaagcggatcagaaagcc
cgccacgtgctcaccgagaaccccgaacagcccgagatgcacgcccacttctgggacgct
ctcctcttgtttcttatccaaggtcgcacggagcaggctcaaaagttgctgcgtctccac
tcggattttggcaacacggaggcgtttggctccttggacgagttgatccgcaagatgccc
cgttactccccccaattgatgatgagctcggtggactttgacttccgcttcaagcactgg
caaaaggaagtccggtcgcgtttggacgaaggcgacttcgcctccagccacgagctccat
cgcttggccttggtgctctccgggtccgaggaggccctgagcgagatggcggacaaatgc
gagacctggtaccaatggatgatcggcaagcttttattcacccaacccgacgtgaaatcc
tacgacttgtcctaccacgcccagcaagccatcaacaaattcggcggtctcagcggcatg
acgtccctcgactcaatcctcttggccgtcatggaatcggacatcgctcaagtgatcaac
gagctcagctccacactggacaaccattggttccccgcccatctcctggacctgctctac
cacacggacccgagcgctttcgagaccaaccccgaggacgcgattgccgccgccaacgcg
tgcggcagtctccgggagtatctgatcctcgagtacggcacgtgcctcatgtcccaccgc
tctctgtggcaagtgggtgccctctacatggaccactgtcccacgcagggcaagtatcgc
ctggaactgctcctggagcggatcccgctggacacggagaccaaggccaacaagatcatg
gccatggccaatgagcgaggcatgtactcgatcgtgggctccacgtgtcgagtcatgggc
atgcaggccttgagggagaaacgcatcgggagtgccatggcgtgggccttgagatcgcag
gacgcgcagttcaccacgttcttggccgatcagttgttgcttcagtattgcgaggagggc
tcgttcacgtcggcggacctgctggaccatctgggctcgtccatggtgttgtcggatcgc
ttgacgttcctggccaaataccgcgagttccaccgcttgtgctcggaagagcaggatttc
aaggcggcggcctcgctgctccactcgttgatgtggtcgaggatggcgcccaaatacttt
tgggtcacgcttctcatcgatgcgttgccgtttgtgagttgtcaggacgaagttttgctc
tcgtccgagcagacttacgagctacttcattgtctacaggagatttccaaagacgagagt
ttacctaaaaagcagaagttgttattagaggaacacgagccgcaaatccgactggaatta
tcccgtaacctggccatagctctaatggaagaaggcgacgaacaagccataaccttggct
cgatga
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