Tigriopus californicus (tidepool copepod): 131892771
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Entry
131892771 CDS
T09700
Name
(RefSeq) DNA topoisomerase 2-alpha-like
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcf03032
]
131892771
03036 Chromosome and associated proteins [BR:
tcf03036
]
131892771
Enzymes [BR:
tcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
131892771
DNA replication proteins [BR:
tcf03032
]
Eukaryotic type
DNA Topoisomerases
131892771
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
131892771
Centrosome formation proteins
Centriole proteins
131892771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
131892771
NCBI-ProteinID:
XP_059098598
LinkDB
All DBs
Position
2:complement(7781008..7786319)
Genome browser
AA seq
1361 aa
AA seq
DB search
MSSDDDDFDPMFDGGGGAAKKPVAKSATTNGATKAGKANGVGGGDGGKKRLSVERIYQKK
SQLEHILLRPDTYIGSVNPVTEKMWVLDADNQRIVNKEITYVPGLYKIFDEILVNAADNK
QRDPKMDTIRIDINAEKNEIKVFNNGRGIPVEMHKDEKMYVPTLIFGHLLTSSNFNDEEE
KVTGGRNGYGAKLCNVFSTKFVVETASKENRKEFKQVWENNMSKAKEAKLKDFSAEDYTR
ITFCPDLPKFNMESLDPDTVALLSRRAYDIAASSKGVKVLLNGKRIPVKNFKDYVDFFIK
GHEDETGNPVKAIYEQAHERWEVAVAVSDNGFQQMSFVNSIATTKGGRHVDYISKMIENN
IAEILKKKNKGGVTIKPHQIRNHIWLFINCLIVNPTFDSQTKENMTLQVNKFGSKCAMTP
KFYTQLSKSGVVESVLAWSKFKADQEMKSKHSSKKTNKLKGISKLEDANDAGTKNSIDCT
LILTEGDSAKTLAVAGLGVVGRDKYGVYPLRGKLLNVREATHKQIMENKEINEMVKIIGL
TYKKKYNSIEDLKSLRYGRLMIMTDQDQDGSHIKGLLINFIHHNWPSLLRLPFLEEFITP
IVKATKGSSSLSFFSMPELQEWKSQTDNWHTYKIKYYKGLGTSTSKEAKDYFSDMNRHRI
LFMHESDQDDHAINMAFSKKAVDQRKEWLTTWMEECKRRKELGLSEIYLYEKQTKSVTYS
DFINKELVLFSNLDNERSIPSVVDGFKPGQRKVMFTCLKRNDKREVKVAQLAGSVGEMSA
YHHGEASLMGTIINLAQNYVGSNNVNLLQPIGQFGTRLAGGKDHASPRYIFTQMSPLARL
IFNPNDDAILNYLTDDNQKIEPEWYMPILPMVLVNGADGIGTGWMTKIPNYNPREIVQNL
LRMLEGHEPEDMNPWFKNFKGHIESLENQRYVVNGEIASISDNKIEITELPIRTWTQSYK
EQVMEPMLNGSDKIPAIIQDYKEYHTDVTVKFIVQMNSDKLRQAELDKGLHQFFKLQTTI
STSSMVLFDAKGCLRKYEGVLDIMREFFHLRLEFYGKRKDYMEGMLEAEALKLSNQARFI
LEKCDGTLVVENKKRKAMIDELHRKGFDSDPVKKWKIAQKLDDVAESDSEEDQDGGDLDY
DYLLGMAMWSLTKERKDDLLKKKDEKHQELRHLRDMSKEDLWKKDLSEFIEKLDEVEAKE
LEDQKSGVSKDKALKGMGKKKKVKEEALPSPVGIRIIPRIAEELKNKAAKAAAAKTKKGE
KLDKKALKETEEEKDEFDFMCDDKDMNRSLSEKLGLSAAPNGIKKATKHKKTTPLSSTDS
SPRKKPKMAAKGKSNPWDDDSDEESDPSDKDFSFDDSDSEF
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgacgacgacgacttcgatcccatgttcgatggcggaggcggagcggccaag
aagccggtggccaagtctgcgaccaccaatggagccaccaaagccggcaaagccaatggc
gtgggtggcggtgatggcggcaagaagcgcttgtcggtcgagagaatctatcagaagaaa
tcccaattggagcatatcttgctccgtccggacacttatattggttcggtcaatccggtg
acggagaagatgtgggttttggatgcggataatcaacggatcgtcaacaaggagatcacc
tatgtgccaggcctgtacaagatcttcgacgagatcctggtgaatgcggcggacaacaag
cagcgagaccccaagatggacaccattcggattgatatcaacgcggagaagaacgaaatt
aaggtgttcaacaatgggcgtggcattccggtggagatgcacaaagacgagaagatgtac
gtgcccacgttgattttcggtcatctcctcacatcgtccaacttcaacgatgaagaggaa
aaggtcacaggtgggcggaatggctacggtgccaagctgtgcaacgtgttctccaccaag
ttcgtggtggaaacggccagtaaggagaaccgcaaagagttcaagcaagtgtgggagaat
aacatgagcaaggccaaagaggccaagctcaaggacttttctgccgaagactacacccgc
atcaccttctgtccggacttgcctaagttcaacatggagtcgttggacccagacaccgtg
gctctgctctctcgacgagcctatgacattgcggcctctagtaaaggagtcaaggttttg
cttaatggtaagcggatcccggtcaagaactttaaggattacgtcgacttcttcatcaag
ggccatgaggacgaaacgggcaaccccgtgaaggccatttatgaacaagcccacgagcgg
tgggaagtggcggtggctgtgtccgacaatggattccaacaaatgtcgttcgtgaatagt
attgccaccacgaaaggcggtcgtcatgtggattacatctcaaagatgattgagaacaac
attgccgagatcctgaagaagaagaacaaaggaggggtcaccatcaaaccacatcaaatc
cgaaatcacatttggctctttatcaactgtctcattgtcaatccgacgttcgattcgcaa
accaaggaaaacatgaccctccaagtgaacaagttcggctcgaagtgcgccatgacgccc
aaattctatactcagctctccaagtcaggcgtggtcgagtcggtcttggcttggtccaag
tttaaagccgaccaagagatgaagagcaagcattcgtcgaagaaaaccaataaacttaag
ggcatctccaaactcgaggacgccaacgacgccggcacgaagaacagcatcgattgcacg
ctcattctcaccgaaggggactcagccaagacattggccgtggccggcttgggagtggtt
gggcgtgacaagtacggcgtctatcctctgcgtggaaagctgctgaatgtgcgagaagcc
acgcacaagcagatcatggagaacaaggaaatcaatgagatggtaaagatcatcggattg
acgtataagaagaagtacaactccattgaagatctcaaatcattaaggtacggaaggctc
atgatcatgaccgatcaggatcaagacggctcgcacatcaagggtcttctcatcaatttt
attcaccacaactggccctctctgttgcgtctcccgttcctggaggagttcatcacgcca
attgtgaaggccaccaagggctcgtcgtcgctctcattcttttccatgcctgaattgcaa
gagtggaagagtcaaaccgacaactggcacacgtacaagatcaagtattacaaaggtttg
ggaacctccacgtccaaggaggccaaggactacttttccgatatgaatcgccatcgaatc
ctcttcatgcatgaatccgaccaggacgatcatgccatcaacatggccttttccaagaag
gctgtcgaccagagaaaggagtggctcaccacttggatggaggaatgtaagcgccgtaaa
gagttgggactctccgagatctatctctacgagaaacaaaccaagagtgtcacctactca
gactttattaacaaagagttggtgctgttctccaatttggacaacgagcggtccatccca
tccgtggttgatgggttcaaacctggccagagaaaagtcatgttcacctgcttgaaacgc
aacgacaagcgtgaggtgaaagtggcccaattggccggatctgtgggcgaaatgtccgcc
taccatcacggcgaagcttctctcatggggacaatcatcaacttggctcaaaactatgtt
ggctcgaacaatgtgaatctccttcaacccatcggtcagtttggaacacgtttagccggt
ggcaaggatcacgcttcgccacgttacatcttcactcagatgagtcctctggcccgattg
atcttcaaccccaatgacgatgcaattctcaattacttgacggatgacaatcagaagatc
gaacccgaatggtatatgcccattctgccaatggtgcttgtgaacggcgcagatggcatt
ggaacgggatggatgactaagattcccaactacaatccgagagaaatcgtccagaacctt
ttgcgaatgctcgagggccacgagcccgaagatatgaacccctggttcaagaacttcaag
ggccacatcgaaagccttgagaaccaacgttacgtcgtcaacggcgaaattgcgagcatc
tccgacaacaagattgaaatcaccgagttacctatccggacttggactcaatcctacaaa
gaacaggtcatggagcccatgctcaatggatcggacaagattccggccattattcaagat
tacaaagagtaccacaccgatgtgaccgtcaagtttattgttcaaatgaattcagacaag
ttgcgccaagccgagctcgacaaaggccttcatcaattcttcaagcttcaaaccaccatc
tccacgtcatcgatggttctctttgatgccaagggctgcctaagaaagtatgagggagtg
cttgacatcatgagagagttcttccatcttcgattggaattctatggcaaacgcaaggac
tacatggaaggcatgctcgaagcagaggcgctcaagctctccaatcaggccagattcatt
ctggagaagtgcgacgggactttggtcgtcgagaacaagaagcgaaaggccatgattgac
gaactccatcgcaaagggtttgactcggaccccgtgaagaaatggaagattgctcaaaaa
ctggacgacgtagccgagagcgattctgaagaagaccaagacggcggtgaccttgactac
gactacctgctgggtatggccatgtggagcctgaccaaagagcggaaagatgacctgctg
aagaaaaaagacgagaaacaccaagagctccgccatcttcgtgacatgtccaaagaagat
ctgtggaagaaggatctttcagaattcatcgagaaattggatgaagtcgaggccaaagag
cttgaagaccagaagagcggcgtgtccaaggacaaagccctcaaaggaatgggaaagaag
aagaaggtcaaagaagaggccttgccatcgcccgtgggaattcgcatcattcctcgaatc
gctgaggagctgaagaacaaggcggccaaggccgcagccgccaagacgaagaaaggagaa
aagctcgacaagaaggctctcaaggagacggaggaggagaaagacgaattcgacttcatg
tgtgacgacaaggacatgaaccgatctctttccgaaaagctgggcctctccgctgctcca
aatggcatcaagaaggctaccaagcacaagaagacgacgcctttgagctccactgattcg
agtcccagaaagaagcccaagatggcggccaaaggcaagagcaatccttgggacgacgat
tccgatgaagaaagtgatccctccgacaaggattttagctttgacgactccgactctgaa
ttttga
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