Tigriopus californicus (tidepool copepod): 131892877
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Entry
131892877 CDS
T09700
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcf03016
]
131892877
Enzymes [BR:
tcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
131892877
Transfer RNA biogenesis [BR:
tcf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
131892877
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GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
131892877
NCBI-ProteinID:
XP_059098727
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Position
2:11938885..11940414
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AA seq
425 aa
AA seq
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MSIELERCQYIVPRKKRSCRMLVKPGNSYCGEHANQEPCLPNDDSSNWAALRVPCPLDGK
HTVLKSKLATHLTKCAAQPTKRPDYCQEGINIPQPRTETTIDKPLTIGGIEDERLMAVIG
KVERVYVQTVHGKITTKILCHEALTEELTQSFYGPSVLKHLKQNASLLGLLEKSNLLQDD
SIFVEFGSGRGLLTYWLTQAVPNANKCDFILVDRASHRHKFDNKLREKKEFSIERIRTDI
QDLCLPNVPAIQSSDKGVVGVSKHLCGAATDLTLRACQQLEQGRLKGLMIALCCHHRCVW
NLFAGCSYLQDLGFLAEEFSLLCGLTSWAICGSGKPRNTKDKEVNVSEGVSDLPDVNPFD
CRYDRLELPRERREFIGLKVKRIFDIARANYVTKTLGLKAELFFYCHPDISPENVVLLAT
TNKTT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgagcttgaaagatgtcaatacatcgtgcctcgaaagaagcgttcttgtcgt
atgttggtcaaacccggaaattcatattgcggcgaacatgccaatcaagaaccgtgcctt
cccaatgatgacagctcaaattgggcagccttgagggttccctgtcctttggacggtaag
cacacagtcttaaaatcgaaattggccactcatttgaccaaatgtgccgcccaacccaca
aagagaccggattactgtcaagaaggcatcaatattccccaaccccgcaccgaaaccacc
atcgataaacccttgaccattggtgggattgaggatgagcgattgatggccgtgattggc
aaagtagaacgggtttatgtccaaactgttcacggtaaaatcaccacgaaaatcctctgc
catgaggctttaacggaagaattgactcaatcgttttacggacccagtgtactcaagcat
ttgaagcagaatgcgtcacttcttggtctcttagaaaaatccaatcttctccaagatgat
tccatcttcgtggaatttggctctggccgtggattattgacctattggctcacccaagcc
gtacccaatgccaataaatgcgatttcattttggtagatcgagccagtcatcggcacaaa
tttgataacaaactcagagagaaaaaggaattctccatcgaacgcattcggaccgatatc
caagatttgtgtctccctaacgtccctgccattcaatcttcggacaaaggggtcgttggg
gttagtaaacatttgtgtggagcagccacggacttgaccttgagggcgtgccagcaattg
gaacaaggtcgtttgaaaggcttaatgattgccttgtgttgccatcatcgatgtgtttgg
aatctattcgctggatgcagctaccttcaagacctcgggtttttggctgaggaatttagt
ctgttatgtggtttgaccagttgggccatatgtggctccggaaagccgaggaataccaaa
gacaaagaagtaaatgtttcggaaggagtttcagacttgcccgatgtgaatccctttgat
tgccgatacgatcgattggaactaccccgagaaaggcgggaatttattggtctgaaagtg
aaacgaatctttgatatcgcaagagcaaactatgtgaccaagaccttgggactaaaggca
gagctctttttctattgtcatcctgatatttctccagaaaatgttgttttactggccact
acaaacaagacaacatga
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