Tigriopus californicus (tidepool copepod): 131892895
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Entry
131892895 CDS
T09700
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03010
Ribosome
tcf04120
Ubiquitin mediated proteolysis
tcf04137
Mitophagy - animal
tcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
131892895
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131892895
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131892895
04137 Mitophagy - animal
131892895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tcf03011
]
131892895
04121 Ubiquitin system [BR:
tcf04121
]
131892895
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131892895
Ribosome [BR:
tcf03011
]
Ribosomal proteins
Eukaryotes
Small subunit
131892895
Archaea
131892895
Ubiquitin system [BR:
tcf04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
131892895
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131892895
Exosomal proteins of colorectal cancer cells
131892895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
Ubiquitin_5
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
131892895
NCBI-ProteinID:
XP_059098743
LinkDB
All DBs
Position
2:12119735..12120497
Genome browser
AA seq
158 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGGKKRKKKNYTTPKKIKHKHKKVKLAVLKYYRVDDNGKIHRLRRE
CQAEECGAGIFMASHFDRYYCGKCGLTYVYAEKDEKNK
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaagaccctcacgggcaagactatcaccctcgaggtggagccctcg
gactcgattgaaaatgtcaaggccaagatccaggacaaggaaggcattcccccggatcaa
cagcgtctgatcttcgccggcaagcaactggaagatggacgaactctgtccgactacaac
atccagaaagagtcgacgttgcatttggtgttgcgtctgcgtggaggcggtaagaagcgc
aagaagaagaattacaccactcccaagaagatcaagcacaagcataagaaggtcaaattg
gccgtgctgaagtactaccgcgtggacgacaacggcaagattcaccgattgagacgcgag
tgtcaggccgaggaatgcggcgcgggcatcttcatggcttcccattttgaccgttattac
tgcggcaagtgcgggctgacctatgtgtacgctgagaaggacgaaaagaataagtag
DBGET
integrated database retrieval system
