Tigriopus californicus (tidepool copepod): 131892921
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Entry
131892921 CDS
T09700
Name
(RefSeq) acetylcholine receptor subunit alpha-like isoform X1
KO
K05312
nicotinic acetylcholine receptor, invertebrate
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131892921
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
131892921
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
131892921
NCBI-ProteinID:
XP_059098776
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All DBs
Position
1:8473177..8494563
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AA seq
846 aa
AA seq
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MDIVKGSRLFRWSWSSRLLKCVFLAFMGILIHHPSGTWAGNPDAKRLYDDLLSNYNKLVR
PVVNVSEPVTVRLKLKLSQLIDVNLKNQIMTTNLWVEQYWYDYKLQWDPQEYGGVDMLHV
PSDHIWRPDIVLYNNADGNFEVTLATKATLMASGKVEWKPPAIYHSSCEMDVEYFPFDEQ
TCVMKFGSWTYDGFQVDLRHIDEEYGRPEVEIGVDLTEFYMSVEWDILEVPAIRNVKYYT
CCEEPYLDITFNVTMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKVSLSISILLS
LTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRTPQTHTMAPWV
RRVFIHILPRLLVMRRPHYDLDKHRTEAFKNPFYTFLTKDNYYSSTTDIDPQLLNESLKS
FTSIAKDTSQALKREQRRRRQQLKQFYYTLASTGQLASSAPSLTSLKQQQQELQQRQYAA
VVAATAAADAAAGVDFSKRVQNSTASNSHGGPNRGKHRILVRTCNGLELREPPYQRDQNL
LPYPPVPSSSFKHMNSTSAVPTGVPTYKLHKASSLDYMGQSTDVNSPLLGGTGDEDLLQH
SPEFPPRAKSSLSHNSVQSQHSFRSMRAPGGIGANENSQAKRRHNGLMTPLDEAVQYSGS
CQIHGNAPRSRYDGYHQSFEGGGHTMSGSQSGFHSNKASASHLNVSGGGPGGAGGRGPGG
LANRLGNGGGGGGARGSNIEPEAPLFTQYQPHLMCPEVSKALSGVMLIAEQKKRLEESTK
VIEDWKYVAMVLDRLFLWIFTVAVLVGTAGIILQAPTLYDDREPLDVKISEIGLATARPM
AGVNKM
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgtcaagggtagccgattgtttcgatggtcgtggtcgtcccggcttcttaag
tgcgtgttcttggcctttatgggaatattaatccaccacccatccggaacctgggctgga
aatccagatgccaagagactctatgatgacctgctttcaaactataacaagctcgtgcga
cccgtggtgaatgtatccgagcctgtcacggtcaggttaaagttgaaactttcccaacta
attgacgtgaacctgaagaaccaaatcatgaccacaaacttatgggtggagcaatattgg
tatgactataaacttcaatgggatcctcaggagtatggtggcgtggatatgcttcacgtt
ccttccgaccacatctggagacctgacattgtcctttataacaatgctgatggaaacttt
gaagtgactttagctacaaaggcaacgctaatggcctcgggtaaagtggaatggaagccg
cccgctatctaccattcctcgtgtgaaatggatgtggaatactttccttttgacgagcaa
acctgcgtaatgaagtttggaagttggacctacgatgggtttcaggtggatttgagacac
atcgatgaagagtacggtcggccagaggtggaaattggcgtggatctcaccgagttctac
atgagtgtggagtgggatattctggaggtgccggcaatcagaaacgtgaagtactacact
tgttgcgaggagccatacctggacatcacctttaacgtgacaatgcgacgaaagacactc
ttctacacagtgaatctcatcattccgtgcatgggtatctcgtttcttaccgtgctggtg
ttttatctgccctcggatagcggtgaaaaggtcagcctgtccatctcgattttgctctcg
ttgactgtcttctttttgctgctggctgagattattcctccgacctcattggttgtgcct
ctcctgggcaagttcgtacttttcaccatgattttagatacgttcagtatatgtgtgact
gttgtggttctcaacgtacattttcgtaccccgcaaacccacaccatggctccttgggtg
cgacgtgtgttcatccacattctgcccagacttttagtgatgaggcggcctcattatgac
ttggataagcacagaacggaggcgttcaaaaatccattttacacattccttacgaaggac
aattactattcttctacgactgatatcgaccctcagctgctcaatgagagccttaaaagt
ttcaccagtatcgcgaaagacacctcccaagccttaaagcgcgagcaacgccgtcgaaga
caacaactgaaacaattctattacacgttggcatcaaccggccaactggcttccagtgct
ccgtccctcacttcgctaaagcaacaacagcaagagctgcaacaacgacaatacgccgct
gtggtcgcggctacagcagcggccgatgctgcggcaggggtggatttctccaagcgtgtt
caaaattccacagcctcaaactctcacggtgggcccaaccgaggcaaacatcgcattctg
gtgaggacgtgcaatggattggaactcagagagccgccctatcagagggaccaaaatctt
ctcccgtatcctcccgtgccttcgtcttctttcaaacatatgaattccacttccgccgtc
cccacgggcgttcccacgtataaactgcacaaagcctcgtccttggattacatgggccaa
tccacggatgtgaacagccctttgctcggcgggacgggggatgaggacttgctccaacac
agtccggaattccctcctcgagccaagtcatccttaagccataatagtgttcagagtcag
catagtttccgttctatgagggctcccggaggtattggtgctaatgaaaactctcaggcc
aaaagacgtcacaatgggttgatgactcccctggatgaggcggtccaatattccggtagt
tgccaaatccatggcaatgcacctcggtctcgctacgacggctaccatcaatctttcgaa
ggtggtggtcatactatgtcgggttctcaaagtggcttccattccaataaagcttcggcc
tctcatctcaatgtatctggcggtggtcctggaggagcgggagggcgaggccctggagga
ctcgctaaccgacttggtaatggtggtggcggtggtggtgcccgaggaagcaatattgag
cctgaggcgcccctctttacacaataccagcctcatctcatgtgtcctgaagtcagtaaa
gctctctcgggagtcatgctaatcgcagaacagaagaagagattggaagaaagcacaaag
gttatcgaagattggaagtatgtggccatggttttggaccgacttttcttgtggatcttc
actgtggctgtcttagtgggaacagccggtatcatattacaggctccgactctttatgat
gaccgagaaccactcgatgtcaaaatatccgagattggactggccaccgctcgaccaatg
gctggagtcaacaaaatgtga
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