| Entry |
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| Name |
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
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| KO |
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| Organism |
tcf Tigriopus californicus (tidepool copepod)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tcf00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131892976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:tcf04121]
131892976
Enzymes [BR:tcf01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131892976
Ubiquitin system [BR:tcf04121]
Ubiquitin ligases (E3)
HECT type E3
131892976
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:4127175..4131960
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| AA seq |
1069 aa
MITLYSWGRGDQGQLGLGGGLESPYVSVPRNIRHVPWISEKADDELGSTRRAHVAQIDSG
DEHTAVLMSNGSVFICGSNDMAQLGHDQSQSRFERIESLSPYKVTHLACGGKHTLALEQW
GKVFSWGSDDRGQLGQNSGEEKWPMPKIIRGLAHLNVVQVACGWKHSLVLTNNGRLFAFG
DNTYGQLGLGNDGGDRVLTPQPIESLSGLPIKKIACGGYHCVVVTMSGAVFAWGRNNHGQ
VGVDGNESKFFPVQIRSLRSQNVAHVACGDEHTVCLTQFGGVFSFGCGRYGQLGHGSWNN
EQSPRQVMELMGTEVSQVACGKRQTLAFVPSRGRLYAFGLAGSGQLGSENTSNSNTPQVV
HGSWVSPMGNMLKAIKRSISLVEQEQLVLFLVGAGGDQSFGAVCPRFFAEQNRLAIDMRK
TSKSASMQVISSDIQDFFRTAKPDQSLDQDLLEILETIFSSTSCLNGSLLTSTHQPCSSK
NSGIDFKAWIEFYSIVKSCPNKTLVEIVENGIIQSIIPKLKQTPPDVETLRVFLTLPLFH
KFDDPTMHEELQTPFANNLISLDKNPWNVIEKWISQQDKSYLKGLVQKLKNVARHILKSR
SQSSTSNRRLETSLVLLRILNRINVDQNLIIDYEDFYIPEVSECLDLVTCYARWLALRSE
GGTEFSICNYPFVFDAVGKSILLHVDQAFQMQKAVHEARSTAMLSNFFVPIIDPDQTSFL
ILHVSRDNIVTDTLTQIRLASRSDLKKPLKIRFQGEEAEDAGGVRKEFFLLILKELLDPK
YGMFKEYEETRTIWFHPLSFEEDQMFFIIGVVCGLAIYNFTIINLPFPLPLYKKLLGDKV
GNLDDLATLSPTIAKGLQDVLAYDKDDLEDVFCLNFALSEEHYGELKTLPLKSGGENIPV
TQSNKKEYVDLHCQFVLNESIKKRFDAFKQGFDLVCAGRVLELFHAHELMAVVVGNQNYD
WDELEKTTEYKNGYTKDHPTIQNFWSVFHNDLTEDDKRKFLLFLTGCDRIPNTGMKSLSM
VIQRTLNVHHLPVAHTCFNILDLPEYATREKLHYKLLKAIQHTSGFGLV |
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| NT seq |
3210 nt +upstreamnt +downstreamnt
atgatcaccctctacagttggggacgaggtgatcaaggacaattggggctagggggaggt
ctagagagcccgtacgtgtcggtgcctcggaatattcgacacgtaccttggatctcggag
aaggccgatgacgagttgggttccactcgtcgcgctcacgtggctcaaatcgactcgggg
gatgagcataccgcagtgctcatgagtaacggcagtgtgttcatctgcggttccaatgat
atggcccaattgggtcatgaccagagccagagtcggtttgaacgcattgagagcttaagc
ccctataaagtcacgcacctggcgtgtggtgggaaacacaccttggcgttggagcaatgg
ggcaaggtcttttcttgggggtccgacgatcgtggtcagttgggacagaactccggggaa
gaaaagtggcccatgcccaagataatccggggcttggctcatttgaatgtggtgcaagtg
gcgtgcggatggaagcatagcctcgttctgaccaacaatggccggttatttgcctttggt
gataacacctacggacaactcgggttgggcaatgatggcggggatcgagttttgacaccg
caacccattgaatcactgagcggcttacccatcaagaaaatcgcttgcgggggctatcat
tgtgtcgtagtgaccatgtccggtgcggtttttgcttggggtcgcaataatcacggacaa
gtgggcgtggatggcaatgaatccaagttctttccggtgcagattcggagcctccgaagt
caaaacgtggcccatgtggcttgtggggatgagcacacggtgtgcctaacccaatttggg
ggggtgttctcgtttggctgtggtcgatacggacaattgggccatggaagttggaacaat
gaacagtctcccaggcaggtcatggagctcatgggcacagaagtgtcgcaagtggcgtgt
ggcaaacgccaaaccttagcctttgtgccatctcgagggcggctttacgctttcggattg
gctggatcgggtcaattgggcagtgagaacacaagcaactccaacacgcctcaagtagtc
catggatcttgggtctccccaatggggaacatgttgaaagccattaagagatctatttcg
ttagtggagcaagagcaacttgttttgtttctcgtaggagccggaggagaccaaagtttt
ggggctgtttgtccgagatttttcgcagagcagaatcgattggcaatcgacatgcgaaaa
acctccaaatccgccagtatgcaagtgatatcttcggacattcaagactttttcagaacg
gctaaaccagaccaaagtttagaccaagatctcttagagatcctggaaaccattttcagt
tccactagttgtctgaacggatcattactcacctcaactcatcaaccgtgttcttctaaa
aattcaggcattgatttcaaagcctggatcgagttttactccatcgtgaagtcttgtcca
aacaagacgttagttgagattgtcgaaaacgggatcattcaatcgataattcccaaacta
aaacagactcctccagacgtagaaacccttcgggtatttttaaccctgcctttatttcac
aaatttgacgatcccaccatgcacgaagagcttcaaaccccattcgccaataacttgatc
tctttggataagaacccgtggaatgtgattgaaaaatggatctcacaacaagacaaatcc
tacttgaagggattggtccaaaagctaaagaatgttgccaggcacatcctcaaaagtagg
tcccaatcatctacgtcaaatcggcgcttggaaactagtctggtgttgcttcgcattctt
aaccgcatcaacgtcgatcaaaacctcatcattgactacgaggacttttatattcccgaa
gtatccgaatgtctggatctagttacgtgttatgccagatggctggccttacggagcgag
ggggggaccgaattcagcatctgcaattatcctttcgtcttcgatgcggttggaaaatcc
atattactgcatgtggatcaagcctttcaaatgcaaaaggccgtacacgaggctcgaagt
acggcgatgttgagtaattttttcgttccgatcatcgatccggatcaaacatcctttttg
attcttcatgtgagtcgggataacattgtgactgataccttgactcagattcgactagct
tcccggtctgacctaaaaaagccccttaagattcgatttcaaggagaggaagctgaagat
gcgggtggcgtgcggaaagaattctttttgctcattcttaaagaactcctagatcccaaa
tatggaatgttcaaagaatatgaagaaactcgaactatttggttccacccattgtcattt
gaagaagatcagatgttcttcatcatcggggtagtgtgtggactggccatctataacttc
acgatcatcaatcttcctttccctctgcctctttacaagaaactcctcggggacaaggtt
gggaacctggacgatctagccactctctctcccaccatcgccaaaggtctccaagatgtc
ttggcctacgataaagacgacttggaagatgtattctgtctgaattttgctctctcagag
gagcattacggagagctgaagacacttccgttgaaatctggcggagaaaatattccggtg
actcaaagcaataaaaaagaatatgtagatttgcattgccagttcgtcctcaatgaaagc
atcaaaaagagatttgatgccttcaagcagggctttgacttggtgtgtgctggacgtgtt
ctcgaattgtttcacgcacatgagctcatggctgtagtggttggcaatcaaaactacgac
tgggatgagttagaaaaaaccacggagtacaagaatgggtacacgaaagatcatcccacc
attcagaatttttggtccgtgttccacaatgacttgacggaagatgacaaaaggaaattc
ctccttttcctcactggctgtgacagaattccaaataccggcatgaagtcattgtcgatg
gtcattcagaggactttgaatgttcaccatttgccggtagcccatacttgtttcaacatc
cttgatctccccgaatacgcaaccagggaaaaactccattacaagctgctaaaggccatc
caacacacctcggggtttggccttgtgtga |
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