Tigriopus californicus (tidepool copepod): 131893018
Help
Entry
131893018 CDS
T09700
Name
(RefSeq) nucleoporin NUP35-like
KO
K14313
nuclear pore complex protein Nup53
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131893018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131893018
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131893018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
RRM_1
Motif
Other DBs
NCBI-GeneID:
131893018
NCBI-ProteinID:
XP_059098910
LinkDB
All DBs
Position
2:complement(11990221..11993496)
Genome browser
AA seq
380 aa
AA seq
DB search
MESMVLGSPVHSPLSPPEFPRTPLAGESYAYGRQTSLNLHSGFQGSGGGGMMPTPTPQHN
ASMGASGYLPGYLMGDPNQQSSGRMISPSKMNRSLSHHHGQQHTSTPQTPGPSAASHLTF
HGEAGNRSVLGSTLAGDGAASTPARNGGFLTPNASYIRTPSAEKPGGPPTRSLFSSMHTP
NSKARGTPMPHTPQLSFGGTPQHNNQSIREEVLNSSSYVQEGVGNWVTVFGFPPSASGYV
LSQFSQCGTVLQHQMPPNGNWMHIKFQTKLQAQKALTKNNKILGGSIMIGVSPCTDANVE
EAANTSCLFNQSLNAHQPAENSMVTNLNSSLGGTQLNRSIRPLAQAYKSANNDLEISGTA
GTPNRSSGIVGKAMEYIFGW
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggagtccatggttttgggctcgcccgtccactcgcccctctcgccacccgaattcccg
cgcactcctttggctggcgagagttacgcctatgggcgccaaaccagcttgaatctccac
tcggggtttcagggcagtggcgggggcgggatgatgcccacgcccacgcctcagcataac
gcttcgatgggcgcttctggctatttacccggatatctcatgggcgatccgaatcagcag
agctctggccgcatgatctctccgtccaagatgaatcgctcgctctcgcatcatcacggc
caacagcacacttcaaccccgcagacgcccggcccctcggcggcttctcatttgaccttt
catggcgaagcgggcaatcgctcggtcttgggctcgactctggcgggcgatggcgccgca
agcacgcccgctcgaaatggcggcttcctcacgcccaacgcgagttatattcgcacgccc
tcggctgagaagccgggaggtccacccacgcggagtttgtttagctcgatgcacacgccc
aatagtaaagctcgaggtacacccatgccccacacgcctcaattgagctttggtggtaca
cctcagcacaataaccaatccatccgagaggaggttctcaatagttctagttacgttcag
gagggtgtgggcaattgggtgaccgtgttcggtttccctccttcagcttcgggttatgtg
ctgtcccagttttctcagtgtggcacggttcttcagcatcaaatgccgcccaatggaaac
tggatgcatatcaagtttcagaccaaattgcaagctcaaaaggctctgaccaagaataac
aagatcctgggcggaagcatcatgataggtgtgtccccatgcactgatgccaacgtagag
gaggccgccaacacctcttgtctctttaatcagagcctgaacgcccatcaacccgctgaa
aattccatggtgaccaatctgaattccagtttgggtggaacacaactcaaccgatccatt
cgacccttggcacaggcctataaatcggccaacaatgacttggagatctctggcacggct
ggcacacccaatcgaagttctggcatagtgggcaaagccatggagtatattttcggttgg
taa
DBGET
integrated database retrieval system
