Tigriopus californicus (tidepool copepod): 131893058
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Entry
131893058 CDS
T09700
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-protein ligase E3B-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131893058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131893058
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131893058
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
HECT type E3
131893058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
131893058
NCBI-ProteinID:
XP_059098967
LinkDB
All DBs
Position
1:8434592..8438472
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AA seq
1095 aa
AA seq
DB search
MAAAGAADSKDSFLTSVRDARHQRQEERARERAAVLIQAALRGHRERLALRARLTAEFDE
CFPPMESGREAGLALHPSAVACFRAARRYRQFHPEPSPHHPPERHERLCRYILASLSVSS
PSGTYIGVALNKECALPWIDHMKGVLILCSARLAHVRLEVASGQREAMTLLRMLVSFSST
HTWTLLQSPGLTALRPGMQKLTHNWLSHLVHQGLYHHLHQLLLRGLAGARVWLSATSVAA
ALNVALKPLIEFQFSHTYLSPFLLKLLSVPGLLIHLEGLSPESLAVMEKHNLLGHCVEIL
KDEQQLKIHFNILEGSYALCMTANLIHLLMQRSAPSLGQPDLPLDMEGTVRMLSGLFECC
GQYVTAKQSNLSHWHPVLGWFSVSLDSYLQHSMDKVHAQLAKLWSWKCINSLSVTLQEVL
IEESAIDMPNLEHFRLSATGEAKTGGGKQLLLRALEKTKTVAANHIPTHPSLTNVIKLDG
PKMKSVGSLCALYRCAMRTLSQIKLEILSSFCYQNRMVHWLWQLIQRLGPHCGLRQFMDQ
LSANPKDPSPQLQIIMLFADXMSYVITLLDDLEMYEKQEPLRLVEVAYLSYSMNQFLFRG
ITSGLLVDPKSSLFQSVHALLMVLYARDNRRYFCPNDHWLIKEIKVSTFLSDLDKGKKPA
LLIMKKMPHVIPRQDRVQLFRKQIAREKQSLGILTSQEASRDHSCPSTLITVHRGRLVED
GYRQLAILSRNALKGIIRVKFVNEQGLDEAGIDQDGVFKEFLEETIKKVFDPTLNLFCAT
TEERLYPSPTSSLTDNHLELFDFVGKMIGKAVYEGIVVDVPFAPFFLSQVLGKDHSSLYS
YIDELPSLDQELYKNLTFIKHLKDDVSDLDLTFAYDQDMMGQVITHELVPGGRAITVTNA
NKISYIHHVAHFRMHQQILDQVAAFTRGFFFVIQPADWLHLFSTPEVQHLISGDSSPLDV
KDLRRHTHYYGGFHDSHRVIAWFWDILDKDFTDKERGAFLKFVTSCSKPPLLGFEHLEPP
FSIRCVEVAEDEDDGDTLGSVIRGFLALRRRDPVNRLPTASTCFNLLKLPNYQKKSTLKE
KLRYAISCNTGFELS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcgggtgcggccgacagcaaggactcgttcctaacgagtgtgcgcgatgct
cgccaccaacgccaagaggagcgcgcccgagagcgggcggccgttctcattcaagcggcg
ctccggggccatcgagagcgcttggctctgcgcgcccgcctcaccgctgagttcgatgag
tgctttccgcccatggaatcaggccgggaggcgggcctggcgctccatccctcggccgtg
gcatgtttccgcgcggcccgtcgctaccggcaatttcatccggagccgagtccccaccac
ccgcccgaacggcacgaacgcttgtgccgctatatcttggcttcgttgtcggtgagctcg
ccctcgggcacctacataggcgtggccttgaacaaagaatgcgccctgccttggatcgac
cacatgaagggcgtgttgatcctctgctcggcgcgcttggcgcacgtacgcctcgaagtg
gccagtggtcagcgcgaagccatgaccttgttgcgaatgttggtgtcgtttagtagcacg
cacacgtggactctgctccagtcgccgggtttgaccgctctgcgcccgggtatgcagaag
ctcacgcacaattggttgagtcatttggtccatcagggactgtaccatcatcttcatcag
ttgctcctgcgcggcttggccggagcgcgggtatggttgagtgccacgtccgtggccgcc
gcactcaatgtggccctcaaaccgctgatcgaattccagttttctcacacttacctgtcg
ccgtttctattgaaactattgagtgtgccgggtttgctgatccatttggagggcttgtcg
cccgagtctttggccgtgatggagaagcacaacctcctcgggcattgtgtcgagatcttg
aaagacgagcagcaactcaagatccacttcaacatcttggaagggagctatgctctgtgc
atgacggccaacctgatccacttgcttatgcaacgcagcgcgcccagtctcggtcaaccg
gacctgcccttggacatggagggaacggttcggatgctcagtggtttgtttgagtgttgc
ggccaatacgtgaccgccaagcaatcgaatttgagtcattggcacccggttttgggctgg
ttttccgtcagtttggatagctatcttcaacattccatggacaaagttcatgcgcagctg
gccaaactttggtcttggaagtgcatcaacagtctgagtgtcacgctccaagaggtgctg
attgaggagtcggccatcgacatgcccaacttggaacactttcgtctgtcagccaccggt
gaggccaaaaccggtggcggcaagcaactccttctccgcgctttggagaaaaccaaaacg
gtcgccgccaatcatatcccgacccatcccagtttgaccaatgtgataaaactggatggg
cctaaaatgaaaagcgtcgggtccctgtgtgctctctatcgttgtgccatgcgaactctc
tctcaaatcaagctggagatcttgtctagtttctgctatcagaatcggatggtccattgg
ctgtggcaactgattcaacggttgggtccgcactgtggtttgagacagttcatggatcaa
ttgtcggccaaccccaaggatcccagccctcaacttcaaattatcatgctgtttgccgat
tgaatgagctatgtcatcaccctactggacgacctcgagatgtacgagaaacaagaacca
ctccgcctggttgaggtggcgtatctgtcttattccatgaaccaattcctctttcggggc
attacaagtgggctcttggttgatcccaagagtagtctttttcagtcagtgcatgccctg
ctcatggtgctctacgcccgagataatcggcgttacttttgtcccaacgatcattggctt
atcaaagaaatcaaagtctctacgttcttgtcagatttggataaaggcaagaagcctgcc
ttgttaatcatgaagaaaatgcctcacgtcattccccgtcaggaccgagtgcaattgttc
cgcaaacaaatcgcccgtgaaaagcaaagtctgggaatcctcacgtcgcaagaggcttcg
cgagatcattcgtgtcccagtacattgatcaccgttcatcgagggcgtctcgtggaggac
ggctaccgtcaactcgccatactgtctcgaaacgccctcaagggcattatccgcgtcaaa
tttgtcaatgagcaaggcttagatgaggcaggcattgatcaagacggtgtctttaaggag
tttctcgaggagaccatcaaaaaagtgttcgatcccaccctgaatttgttttgcgccacc
acggaggagcgcctctacccctcgcccacatcgagcctgaccgacaatcacctcgaattg
ttcgactttgtgggtaaaatgattggaaaggccgtgtacgaaggcatagtggtggatgtg
cccttcgcgcccttcttcttaagtcaggtcctgggcaaggatcactcgagtttgtacagc
tacatcgacgaactgccatccttggatcaggagctctacaaaaacttgactttcatcaag
catttgaaggatgatgtatcggatctggacctgacttttgcttacgaccaagacatgatg
ggccaagtcataacccacgaactggtgcccggtggtcgggccattaccgtgaccaacgcc
aacaagatcagctacattcaccacgtggcacactttcggatgcaccagcagatcctggac
caagtggcggctttcactcggggatttttcttcgtcatccaaccggcggattggttgcat
ttgttttccacgcccgaagtccagcacctgatctccggtgatagctcgcccttggatgtg
aaagatctccggcgacacacccattactatggcggctttcacgattcgcatcgcgtgatc
gcctggttttgggacatactggacaaggactttacggacaaggagagaggcgccttcctc
aagttcgtgacctcgtgctcgaagccgcctctcctggggttcgagcatctggagccgccc
ttctcgatccgatgcgtggaagtggccgaggacgaagacgatggcgacacgttggggtcg
gtaatacggggttttttggccttgcgtcgccgcgatcccgtcaaccgattacccacagcc
tcgacgtgtttcaacttgctaaaattacccaactatcagaaaaaatccacgctcaaggag
aaactcagatacgccatttcttgcaacaccggatttgaattgtcatga
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