Tigriopus californicus (tidepool copepod): 131893065
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Entry
131893065 CDS
T09700
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
131893065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131893065
Membrane trafficking [BR:
tcf04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
131893065
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
HisKA
Fusion_gly
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
131893065
NCBI-ProteinID:
XP_059098977
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All DBs
Position
2:complement(10062302..10063344)
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AA seq
236 aa
AA seq
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MSAASSERFELIQDDLETILEGILSSLTILSKKSQSSKAGSKEEVRHWIMRTRSSLVEAR
KLIEDMEQEARLAPIQFRGDMLTKVRQYREDTAKLQAQLRGFTEINTSGFGDSLNIRNPR
DGPDWPEVTVEDRYRRQVLEGSNILERTSQSIQRSEQVAVETEAVGGEIISDLSVQREQL
ERTRGRIYDTYDELSRSQRILRRIYFGVIQNKVVLIVIIVIEILIIAGLVYLRFFS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggcatcctcggagaggttcgaactcatccaggatgacttggagacgatcttg
gagggaattctctcgtccctgacaatactttcaaaaaaatctcaaagttccaaggctggc
tccaaagaggaggttcgccattggatcatgcgtacccggagctcgttggtggaagctcgg
aaactcattgaagacatggaacaagaagccagactggctccaattcaattcagaggagat
atgttaaccaaagttcgacaatatcgcgaagatacagccaaactacaagcacaattgaga
ggctttaccgagatcaacacctcaggttttggagattctttaaatattcgaaaccccagg
gatggaccagactggccagaggtcacagtggaggaccgatatcgcagacaagtcctggaa
ggatctaatattcttgagagaaccagtcaaagcatacaaaggtctgaacaagtagctgtc
gaaaccgaggctgttggaggagagatcatctcggatctgagtgtgcaaagggagcaattg
gaacgaacgagaggacggatctatgacacttacgacgaactttcgaggagccagcgaatt
ctccgaagaatctattttggggtgatccaaaacaaagtggtgctcattgtgataatcgtg
attgaaatcttgatcattgccggacttgtctacttgcgattcttttcctga
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