Tigriopus californicus (tidepool copepod): 131893175
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Entry
131893175 CDS
T09700
Name
(RefSeq) integrin beta-PS-like
KO
K06590
integrin beta 7
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04512
ECM-receptor interaction
tcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131893175
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131893175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131893175
04515 Cell adhesion molecules [BR:
tcf04515
]
131893175
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131893175
Cell adhesion molecules [BR:
tcf04515
]
Integrins
Integrin beta subunits
131893175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
vWA_SIBA-E
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
I-EGF_1
DUF5966
Motif
Other DBs
NCBI-GeneID:
131893175
NCBI-ProteinID:
XP_059099123
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Position
2:complement(5052289..5054827)
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AA seq
789 aa
AA seq
DB search
MTSWLVLISVLSLAVIGVVAGVPAECQRFTSCGECMSNFDCAWCLDNTTSASITSQRCIS
MQEREETCQNFEYSQSSFEILSQLAVGSQLNDEEHTLISPQKATVYLRPGDKLPQTIPIK
AAQLKEYPIDVYVLMDLSLSMNESRKTFALEAVNVIKEFQKITSNLLLGFGSFVDKDLSP
FSSTQDTMVCPDQQDKCMRPYGFHNQISLKNLTADEFKNKLLNANLAGNIDEPEGSLDAL
MQVLTCTQEIKWRYRSRKMVVLVTDRDFHFAADGRLLGILERNDGQCHLDEQGFYSESKN
QDYPSLSQVGEKVYDGEFNLIAAVIPKYTHIWQALEQVVPNMYVVALEKDAANIVDIVAT
YTERVSRKIQLLVSDDFHDLGLSIEIYSECLGSELRPVRECDDIPLDTVVDFEVRFRASK
CLPEPKTITLSMSGFLQTLEIKVQTQCSCPCQNESPPEANEQCNNHGKFECGGCQCESEY
IGNTCQCKKDVDNDDESRKECVDPLGPKDLICNGRGTCKCGVCVDCYQSYDSFCQCRDDD
CQKTESGLCDGHGQCQCGTCSCNAGWSGDDCSCSQSTYGCVSPYNQEICSGQGRCRCNRC
DCIQQDTGAYTGSFCQLAPDETFPCEVLTNCVECLAFQTGDRAANDCDSCGHISLQNQTE
TYTEQTVCTGLDWENCEFKFSYENGGEMSPVAAFLLLYPNGERRMCPLRVDLAIAGGVFV
AGLVLLGLAFICCYKCYLVFDDRRQYAKFSKEAEQLRYAGNQNANDVYRSPITIYKNPMH
GREIPSMRT
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgacctcttggctggtcttgatatcggttctgagtttagccgtgatcggtgttgtggcg
ggtgtgccggcggaatgccagcggtttacctcttgcggagaatgtatgtcaaatttcgat
tgtgcgtggtgcttagacaacacgacgtccgcctctatcacttcccaacgatgtatctcg
atgcaggagagggaggagacatgtcaaaacttcgagtattctcaaagttcattcgagatc
ttgtcccagctggcggtgggctcacaattgaatgacgaggagcacaccctcatctccccg
cagaaagccaccgtctatctacgaccgggcgacaaattgccgcaaacgattccgatcaag
gcggcccaactgaaggaataccccatcgacgtgtacgtgcttatggacttgtcgttgtcc
atgaatgaatctcggaagacctttgctctagaggccgtaaacgtgatcaaggaattccag
aagatcaccagcaatctgctcctcgggttcggcagctttgtggacaaggatctttcacct
tttagtagcacgcaggacaccatggtgtgtccggatcagcaggataagtgcatgagacct
tacgggttccacaatcaaatctccttgaagaatttgacggccgacgaattcaagaacaag
cttttgaatgccaacctggcgggaaacatcgacgagcccgagggcagtttggacgccctg
atgcaagtgctgacctgcacccaggagattaagtggcgctaccgctccaggaagatggtg
gtactcgtgacagatcgggatttccatttcgccgctgatggacgcttgttggggatcctg
gaacgcaatgacggccaatgccacttggacgaacaaggcttttactcggagtccaaaaac
caggattacccctctctatcgcaggtgggtgaaaaggtctatgatggcgagttcaatctc
atcgccgccgtcattcccaagtacacccacatttggcaagctctggagcaagttgtgccc
aacatgtatgtggtggcattggagaaggacgctgccaatatcgttgacattgtcgccact
tacactgagcgggtctcgcggaaaatccagcttttggtttcggacgacttccacgatctg
ggcctgtccatcgagatctactccgagtgtttgggatccgagctcagaccagtgcgcgaa
tgcgatgacattcctttggacacggtggtggactttgaagttcgattccgcgcctccaaa
tgcctccctgagcccaagaccatcaccctctccatgtccggattcttgcagactttggaa
atcaaggtccaaactcaatgcagttgcccgtgtcaaaacgaatctcctcccgaggccaat
gagcaatgcaacaatcatggcaagttcgaatgtggcggttgtcaatgtgagagcgagtac
atcggcaacacttgccaatgcaaaaaggatgtcgacaatgacgatgagtcccggaaagag
tgtgtggatcctctggggccgaaggatttgatttgcaatggtcgcgggacctgcaaatgc
ggcgtttgcgtggattgctaccaaagctacgacagtttctgccaatgtcgagacgacgac
tgccagaagacggagagcggcctctgtgatggacatggccaatgtcaatgtgggacttgc
agctgcaatgccggttggagtggcgacgattgctcctgcagccaaagcacctatggctgc
gtgtccccgtacaatcaagagatctgctcgggtcagggccgatgccgatgcaatcgatgc
gattgtatccaacaagacaccggggcgtacaccggaagcttctgccaattggcgccagac
gagacgtttccatgcgaggtgctgacgaattgcgtggaatgtctggcatttcaaactggc
gatcgtgccgcgaatgattgcgattcatgtggccacatcagtctccagaaccaaactgaa
acctacacggaacaaactgtttgcaccggattggattgggaaaattgcgagtttaagttt
tcatacgaaaacggcggggaaatgagcccggtggccgctttcttgctcttatatcctaat
ggggaacgacggatgtgtccacttagagtggacttggccatcgccggtggggttttcgtc
gctgggttggtgctgttggggctagcattcatttgttgctacaaatgctatcttgtcttt
gacgatagacgacaatatgccaaattctccaaagaagcggagcaactccgatacgccggg
aatcaaaatgccaacgatgtgtaccgttcaccgatcaccatctacaagaatcccatgcat
ggccgcgaaatccccagtatgaggacttaa
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