Tigriopus californicus (tidepool copepod): 131893228
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Entry
131893228 CDS
T09700
Name
(RefSeq) RNA-binding protein Musashi homolog 1-like
KO
K14411
RNA-binding protein Musashi
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131893228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131893228
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131893228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
131893228
NCBI-ProteinID:
XP_059099188
LinkDB
All DBs
Position
2:complement(13569640..13573172)
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AA seq
471 aa
AA seq
DB search
MMSPSAVSESPTPRDRPSETVLSVPLATLSGASSSGGVSSSLPVSGGSSASSGEPVDLSY
FQAALSFHPAWPEGDIPNDPGKMFIGGLSWQTTPESIREYFSLFGDLAEVMVMKDPATRR
SRGFGFITFCEPSSVEKVLSIPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSAT
TSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMV
ESKKALPKEPRGGYGGNGGGAYYQMSGGQPQYSTYDNNNSYCMGVAPQRSAYPRFAAKTY
NQYYGGRADGPVSNQSNYNNQVHQHHSNNNGGMSNFDNHNYHHNGHRYESSTGSTGGVAD
LSHTSPMMSKPGSMGGTFSNTKYNQYLNDRNYGMFTSSSALGGGPQPGGLGDENELEDHE
GVLAFRKDPSVYTGGLGGGRGGGSSSNMDDFPPLNNCNMNGNNPRSSLGSF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtccctcggccgtgtccgagtcgcccacgccacgcgatcgaccgtctgagacg
gtgctgtccgtgccactggccacgctctcgggcgcctcctcctcgggcggcgtgtcctcg
tccttgccggtgtccggcgggtccagcgcttcttcgggcgagcccgtggatttgagttac
ttccaggcggccttgagctttcacccggcttggcccgagggcgacatccccaatgacccg
ggcaagatgttcatcggcggcttgtcgtggcagaccacgcccgagagcatccgggaatac
ttctccttgttcggagacctggccgaggtcatggtcatgaaagacccggccactcgccgc
tcacgcggcttcggcttcatcacgttttgcgagccgtcctcggtggaaaaggtgctgagc
atccccgtgcatcatctggatgggaagaatgtggagcccaaagtggccgtgccccggaaa
accaatcccaagttagtgatgcggaccaagaagatctttgtgggcggcttgtcggccacc
accagcctcgaggatgtcaaagcctacttcgaacagttcagcaaggtcaaggatgccatg
ttggcttacgacaaggtcaccaatcgccaccgtggtttcggctttgtcacctttgacaac
gatgaggtcgtggataagatctgtgagatccacttccacgaaatcaacggcaaaatggta
gagagcaaaaaggccttgcccaaagagccccgaggtgggtacgggggtaatggcggtggt
gcttattaccaaatgagcggtggccagccccagtactcgacttacgacaacaataactcc
tactgtatgggcgtggcacctcaacggagcgcgtacccccgtttcgcggccaagacttac
aatcaatactacggcgggcgagcggatggacccgtcagcaatcaaagcaattacaacaat
caagttcatcagcaccatagcaataataatggtggcatgagcaacttcgacaaccacaat
taccaccacaacgggcaccgctacgagtcctcaacgggctccacggggggcgtggccgac
ctgagccacacctcgcctatgatgtccaaaccggggtccatggggggcaccttcagcaac
acaaaatacaaccagtacttgaatgatcgcaactacggcatgttcacctcgtcctcggcc
ttgggaggcgggccacaacccggtgggctgggcgacgagaacgagctcgaagaccacgag
ggcgtcttggccttcaggaaggacccgtccgtctatacgggcggattaggcggggggcgt
ggcggtgggagttcgtccaacatggacgacttcccgcctctcaacaactgcaatatgaat
gggaacaacccgcgatcaagcctcggctcgttctga
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