Tigriopus californicus (tidepool copepod): 131893285
Help
Entry
131893285 CDS
T09700
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04120
Ubiquitin mediated proteolysis
tcf04137
Mitophagy - animal
tcf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131893285
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
131893285
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
131893285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131893285
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131893285
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
131893285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
131893285
NCBI-ProteinID:
XP_059099250
LinkDB
All DBs
Position
2:14193541..14196793
Genome browser
AA seq
360 aa
AA seq
DB search
MSGNPLGNNGPTAGNSPPNAASSPLSSVGNGGGGPKSRMVPLGGGGVGGGLTLGGNGVGS
ASVGSNGSVSGNGSVVGGAAAAVAVGGAGVNVVSNVPLQNVPPQNSSANQDLASLFECPV
CFDYVLPPILQCHAGHLVCSSCRPKLTCCPTCRGQLGGNIRNLAMEKVASTVMFPCRYQS
SGCGTSLLHTEKLDHEETCEFRPYSCPCPGASCKWQGSLEQVMSHLMQVHKSITTLQGED
IVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKFDGHQQFFAIVQLIGTRKQAENFA
YRLELNGHRRRLTWEATPRSIHEGVSSAILNSDCLVFDTSIAQLFADNGNLGINVTISMC
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggaatcctttgggcaataacgggcccacggcgggcaattcgccgcccaatgcg
gcttcttcacccttgagttcggtgggcaatggtggcggcggtcctaaatcgcgcatggtg
ccgttggggggcgggggggtgggagggggtttgaccttaggcggcaatggggtgggctca
gcctcggtggggtccaatggctcagtcagcggaaatgggagtgtggtgggcggtgcggcg
gcggccgtggccgtgggtggagcgggtgtgaatgtggtgtcgaatgtgccgcttcaaaat
gttcctccgcagaattcatcggcgaatcaagatttggcctcgttgttcgaatgtccagtg
tgctttgattacgtcttacccccaatacttcagtgtcatgcgggtcacttggtgtgctcg
tcttgtcgtcccaaactcacgtgttgcccaacctgccgcggacagctcggtgggaacatt
cgcaatctggccatggaaaaggtggcctccaccgtcatgttcccgtgtcgctatcagagc
tcgggctgcggcacgtccctcctccacacagagaaactcgatcatgaggaaacctgcgag
tttcggccgtactcgtgtccttgtccaggggcctcgtgtaaatggcaaggatctctcgaa
caagtcatgtcgcatctcatgcaagttcacaagagcatcaccacactccaaggcgaggat
atcgtcttcctcgccaccgacatcaatctacctggagccgtggattgggttatgatgcag
agctgttttgggcaccatttcatgttggtgctcgagaagcaggagaaatttgacggtcat
caacagttttttgccattgtccagctcatagggacgaggaaacaagccgaaaactttgcc
taccggctcgagctcaatggccacaggcgacgcttgacgtgggaagccacgcctcggtcc
attcatgagggcgtgtcgtcagctatattgaattcagattgcttggtcttcgatacgtcc
atcgcccaattgttcgcagataacggaaatttaggcatcaacgtaaccatctccatgtgt
tga
DBGET
integrated database retrieval system
