KEGG   Tigriopus californicus (tidepool copepod): 131893350
Entry
131893350         CDS       T09700                                 
Name
(RefSeq) aprataxin-like
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    131893350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcf03400]
    131893350
Enzymes [BR:tcf01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     131893350
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     131893350
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     131893350
DNA repair and recombination proteins [BR:tcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     131893350
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     131893350
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT Yop-YscD_cpl FHA zf-H2C2_5
Other DBs
NCBI-GeneID: 131893350
NCBI-ProteinID: XP_059099331
LinkDB
Position
2:13562177..13563100
AA seq 307 aa
MTSIPVKLFLRSTKKAHPDIPLSHMKSVEIGRSPQTKIKDTKVSKKHLRLLANCFARSVQ
VTQLGANPSWVQGSILKTDETRNIAPNDILELGQDDHRYELIMEAPKATKDPSQTHLEDR
ALVHPGHWSMALIRAIKDDTLKLFEDDSMVVIRDAYPKARQHYLVVAKDSIDSLKEMDLE
NVALLEQMIAKGHDFKAKHPDLEFRLGFHAIPSMARLHLHVVSQDFDSPCLKNLKHWNSF
TSEFFVPADVVLAKIKSDGVYPQISGEESKKLLSTPLKCHKCSYKPKHLPDLKKHIVLKH
YPKKMRE
NT seq 924 nt   +upstreamnt  +downstreamnt
atgacctccatcccggttaaactctttcttcggagcactaaaaaagcccatccagacatt
cctctaagtcacatgaagtcggtagagatcggtcgtagtccccaaaccaagatcaaagac
accaaagtctcgaagaaacacttgagacttctggccaattgtttcgccagaagtgttcaa
gtcactcaattgggagctaatcccagttgggtccaaggatcgattctgaaaacagacgaa
actcggaacattgcccctaatgatatcctggaacttggtcaagatgaccaccgctacgag
ctgatcatggaagctcccaaagccacgaaagatccgtcccaaacccatcttgaggatcga
gcgctggttcatccgggtcattggtcaatggctttgattcgtgccatcaaagatgatact
ctcaaactcttcgaagacgactcgatggttgtcattcgggatgcctacccaaaagcccgg
caacattatctggttgtggccaaagatagcattgactctttgaaagagatggatctcgag
aacgtggctctcttggagcaaatgatagccaagggccacgatttcaaagccaaacatccg
gatttggaattccgactgggtttccatgccatcccaagcatggcccggcttcatcttcat
gtggtgagtcaagactttgattcgccttgtctcaagaacttgaagcattggaactctttc
accagcgagttcttcgtgcccgcagatgtggtcttggcgaagatcaaaagtgacggcgtg
tacccgcagatttctggtgaggagagcaagaagcttctgagtacgccgttgaaatgtcac
aaatgctcctacaagccaaaacatctacctgatctcaagaagcatatcgtgttgaagcat
taccctaaaaagatgagggaataa

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