| Entry |
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| Name |
(RefSeq) vinculin-like isoform X1
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| KO |
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| Organism |
tcf Tigriopus californicus (tidepool copepod)
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| Pathway |
| tcf05100 | Bacterial invasion of epithelial cells |
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| Brite |
KEGG Orthology (KO) [BR:tcf00001]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131893423
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131893423
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:tcf04812]
131893423
04147 Exosome [BR:tcf04147]
131893423
Cytoskeleton proteins [BR:tcf04812]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
131893423
Exosome [BR:tcf04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131893423
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(3277184..3295083)
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| AA seq |
1616 aa
MEISQSDPLSHEMRGNQTDLDLVDVFGFLIGAVSRLVIIHEEGEAGHEMPDLERPVFAVS
KAVTNLVKTGRELLRLESERVGREMSTSTDDLILKQDMPQALNKVDEAARLLVEAAKLSK
IDPLSKPARMKLIEGSRWILQGTSNVLLVFDESEVRKIVQDCKKTLDYLSVAEVVENMED
LVQFVRDLSPILSRVTVEVCKRTEDLTHQIHREVLNRCVEQVKTLAPILICSMKIFIQIL
SQDGKGVEEAAENRNYLCGRMSEELNEIIRVLQLTTYDEDEWDSDNLTVMKKVQNAIESS
MQNAHDWLKDPKSLHGGVGEKSVRRILEQALKVAERSLPLDSEHMKKLVGDIQCMTDSLC
ELRQKGEGTTPQAETLAANIESRLHELVATVQQAINRVEKSGIQQPAPTVSGRLEQARRW
LEQPAVNDRGLGQQAIALVVEEGLKIADVLPAGHRDEVGGLCRRIQTDAYSLTMLCQSEQ
GESPRAVELARSIAGNLNRLKDVIRNALVDRVVNDFLDAGTPLKQFTECVLSPHPAEETR
DRIFEDKAIRLTTFSERAIQTAKMVAVGTNSGNKKVAEALLAYAAQVDSLAPQLVNAGRI
RMTYPENKAADEHFENLRHQYAEAVHRVRGLCDEATDSLAFIEQSLEAMEDRTAKCEDAV
RSGQALKMVENTSALARMTNRVIQVAKQEAENSEDPRYISELHISAEQLQARIAPMVQSA
KSLAMHMNDDALINEWRSNNRKLLDSVEGVKSAVAQYPADSLPPPLPPYPKIGDLSLSDT
QSKRSATMPVANGSARNHRPSYQRSHGQEDKKVFTDSELSEIFQIDFGEIFGSPDITVPD
SNYRGINLPSKNHRGTDSYRRTQKQLESKKASQISSSSTSSSFSYSNAALPPPSQFANGG
HKLAKSASSGQIKVPVLPSLSDPVQFGKPPPARPREPQPSHDQIDADALIDELMREAEND
PGLRKMSGLDKPKPPAQAPIPDKYAFVARPYRTAQDMIIRDHDSTTNHDPHQFNRISRSS
DKHRSSHNHRSATQRDQRISEPSDSWSRSKSADSRPSAPYSGLARKDPKLSNFKRTSSSD
NFTEGIMHEVVTDQDNHSVKDLVAMIEKNTTSESVNPYIRKWGCDLISPEPHTKTKTYRR
ERRQMPDYEAKGMYNWTLDSSYRSGGMNGEHKNAKDWGGSLHESSKHHDKQSLFDNDFRL
SAHVADMDDLLGKSGQVNDGYASEGERSVHWPPEDQLSTSDKRSASKKASQHLSASNGHA
SSQPPPKATSAMDEQIASIQCDFEAELDNMLLDTQKTTPSNYPHHGNGVILKNNLRNDIA
SRKNQQYQHSHSSSRINKKMNASLQKSSARKTASSNKRDYLSSSHAGMPPLAPVSDEDGS
YQALSVVFQDIKKDSGSAPPPRPPPPSSNHGHSFLQDHSGYAETTDDESEDLFLHAPTPS
QGPIMMAAHDLHQEVKQWSSKDNDIIAAAKKMALLMAKLSQLVNEDTGSKRDLIACAKAT
ADASEEVTRIAKELAKECTDKRMRTSLLQVCERIPTIATQLKILSTVKATMLGAQGVSRI
GTEEDQEATEMLVGNAQNLMQSVKQTVTAAEAASIKIRTDAGIKLRWVRKQPWYQY |
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| NT seq |
4851 nt +upstreamnt +downstreamnt
atggagatcagccagagcgatcctctcagtcacgaaatgaggggaaaccagactgattta
gacctagtggatgtgtttggcttcctcatcggagctgtgtctcgattggtgatcatccat
gaggaaggcgaggccggacatgagatgccggacctagaacggccggtgtttgccgtgtcg
aaagccgtgaccaatttggtgaagaccggtagggaactgctcagacttgagtctgaacga
gtcggaagagagatgtccacatccacggacgatctcatcctcaaacaagacatgccccaa
gccttgaacaaagtggatgaagcggccaggctattggtggaagccgcaaaactcagcaaa
attgacccgctctccaaaccggctcggatgaagctcatcgaaggatccagatggatcctc
caaggcacttccaatgtcttattagtgtttgacgagtccgaagttcgaaagattgtgcaa
gattgcaaaaagacactggactatctctctgtggccgaagtcgttgaaaacatggaggat
ctggttcagttcgtccgggatctttcgcccattctgagtcgagtcacagtcgaggtgtgc
aaacgaaccgaggacctgactcatcaaatccatcgggaagtgttgaatcgttgcgtggag
caagtcaaaaccttggcccccatcttgatttgttccatgaagattttcatccagatctta
agtcaggacgggaaaggggtggaagaagcggccgagaatcgcaactatctctgcggaaga
atgtccgaagagctcaacgagatcattcgagttcttcaattgaccacgtatgatgaggat
gaatgggactcggacaacttgactgtaatgaagaaggtgcaaaacgccatcgaaagttca
atgcaaaacgcccacgactggctcaaggatcctaaatcccttcatggcggggtcggagaa
aaatccgttcgacggatcctggagcaggccctgaaagtggcggagcggtctttgccctta
gactctgagcacatgaagaagcttgtaggcgacatccagtgcatgaccgacagcttgtgt
gaattgcggcagaaaggagagggaaccacccctcaagccgaaacgctggccgcaaatatc
gagtcaagactgcacgagctggtggccaccgtccaacaggccattaacagagtggagaaa
tcgggcattcaacaaccggcgccaacggtgtcaggtcgtttggaacaagcccgaagatgg
ttggaacaaccagcagttaatgaccgaggcctcggacaacaagctatagccttggtagtt
gaagaagggttgaagattgcggacgtccttcccgctggtcacagagacgaagtgggcggc
ctttgtcgacggattcaaaccgatgcctacagtctgaccatgctgtgccaatctgagcag
ggcgagtctccacgtgccgttgagttagcacgaagtatcgcaggcaatttgaatcggctc
aaggatgtcatccgcaatgctctcgtcgatcgagtggtgaatgacttcttggatgcgggc
accccattgaagcaattcacggaatgcgttttatcgcctcatccggcagaagagacccgc
gataggatttttgaggacaaagccattcgattaacgaccttctccgagagagccattcaa
acggcgaaaatggtggccgtgggaacaaattcgggcaataagaaagtggccgaggctttg
ctggcttatgctgcacaagttgatagtctggcccctcaattggtgaatgcgggtcggatc
cgaatgacttacccggagaacaaggcggctgatgagcactttgagaatttgagacatcaa
tatgctgaggctgttcatagggtccgtggactttgtgacgaagccactgactcgttggcc
ttcatcgagcagtccttggaagccatggaggatcggacagctaaatgtgaggatgccgtt
cggtcaggtcaagccttgaaaatggttgagaacacgtcagctttggcacgcatgaccaat
cgagttatacaggtagccaaacaggaggcggaaaactccgaggatccccggtacatttct
gaattgcacatttcagccgagcaactccaagcacgaattgcacccatggtccagtccgcg
aaatctctggccatgcacatgaatgacgatgctctgatcaatgaatggaggtccaacaac
cgcaagctattagattctgtggaaggtgtaaaaagtgctgtggcgcaatatccggccgat
tcactgccacctcctctgcctccctatccgaagataggggatctatcgttatcagatacc
cagtccaagaggagtgccacgatgcccgtggctaacggatccgcccgcaatcaccgtcct
tcatatcagaggtctcatggccaggaagacaagaaagtgttcacggactctgaactgagc
gagatttttcaaatcgatttcggcgaaatcttcggctcacctgatatcaccgtcccagac
tcgaactatcggggaatcaacttgccatccaagaatcatagaggcacggattcgtatcgg
aggacccaaaaacagttggagagcaagaaggcttctcagatttcctcgtcttccacttcg
tcttccttttcatattcaaacgcagccctccctcccccatcccaattcgcaaatggaggt
cacaaactggcaaaaagtgcttccagcggtcaaatcaaggtcccggttttgccttcactc
tcggacccggttcaatttggcaagcctccacctgctcggcctcgcgagcctcaaccaagt
catgatcaaattgatgccgatgcgttgatcgacgagctcatgagagaggcggagaacgat
cccggattaaggaaaatgagtggtctggataaaccgaaacctcctgcccaagcgcctata
cccgataaatacgcctttgtggcccgcccatatcgaacggcccaagatatgatcattcgg
gaccacgattctactaccaaccatgaccctcatcaattcaaccgcatctcaaggtcgtcc
gacaaacaccggtcaagtcataatcacagaagtgcgactcagcgggatcaacggatttct
gaaccttcggactcgtggagtcgatccaagagtgccgattctcgcccttctgccccttac
tcgggattagcgcggaaagatccaaaattgtccaacttcaagcgaacgtcgtcctctgat
aacttcactgagggtatcatgcatgaggtggtaacggatcaagacaatcactctgtcaag
gatctcgtggccatgattgaaaaaaacaccacttcggaaagcgtgaatccttacattcga
aagtggggatgtgacctcatcagtcctgagccgcacactaaaacgaaaacttaccgtcgt
gaacgcagacaaatgcccgattatgaggctaaaggcatgtataattggaccttggactcg
tcctatcgatctggtggaatgaacggcgaacacaaaaacgcaaaggattggggtgggtcc
ttacacgagtcctctaaacatcacgacaagcagtctctcttcgacaatgatttccgtttg
agcgcccatgtggcagatatggatgacttgttgggcaagtctggtcaagtcaatgacggc
tatgcaagtgagggcgagagatcagtccattggcctcctgaagatcaacttagtacctca
gacaaacgatcagcctccaagaaagctagccaacacttgtcggcgtccaatggccacgcc
tcctcccaacctccacccaaagctacgagtgccatggacgaacaaattgcctcaatccaa
tgcgactttgaagctgaattggacaacatgctattggacactcaaaagactaccccctca
aactacccacaccatggaaatggagtaattttgaaaaacaacctccgaaacgatatcgct
agccgcaagaaccagcaataccaacactcgcactcctctagtcggataaacaaaaaaatg
aacgcgtcgctacaaaaatcatcggctcgaaaaaccgcgagtagtaacaaacgggattac
ttgtcatcctcgcacgctggaatgccacctttggcacccgtctcagatgaggacggctca
tatcaagctctatctgtcgtatttcaggatatcaagaaagactccggttcagccccaccg
cctcgccctccgcctccttcaagcaaccatggtcattccttcctgcaagatcactcaggc
tatgccgagacgactgatgacgaatccgaggatttgttcctgcacgcacccacgcccagt
caaggacccatcatgatggcggcgcatgatctccatcaagaggtgaaacaatggtccagt
aaggacaatgacatcattgcagcggccaagaagatggccttgctaatggccaagctatcg
caattggtcaatgaagacaccggttctaaacgggatctaatcgcttgcgctaaggccaca
gctgacgcgtccgaagaggtgaccagaatcgccaaagagttggccaaagaatgcacagac
aagcgcatgcgaacgagcttgctgcaagtttgtgagcgaatcccaacgattgccacgcaa
ttgaagatcctttctacggtcaaggctacaatgttgggagcacaaggagtctctcgtatt
gggactgaagaggaccaagaagctactgaaatgttagtgggcaatgcgcaaaacctcatg
caatccgtgaaacaaaccgtgaccgctgctgaagcggcttccattaagattcgcacggat
gcgggcatcaaactgagatgggtgcggaagcagccgtggtatcagtactaa |
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