Tigriopus californicus (tidepool copepod): 131893426
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Entry
131893426 CDS
T09700
Name
(RefSeq) ubiquitin-protein ligase E3C-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131893426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131893426
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
131893426
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
HECT type E3
131893426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
VMAP-M8
Capsid_VP7
Motif
Other DBs
NCBI-GeneID:
131893426
NCBI-ProteinID:
XP_059099440
LinkDB
All DBs
Position
2:3137239..3151480
Genome browser
AA seq
1077 aa
AA seq
DB search
MFSFNGEFRRKPVINIRGASKSAHKDELVENAQKERQKREKFRVDTRSANVIQSGIRSFL
TRCSIYEHWRGQFDEFKAAQNYAPAWIRINFFFKVQSDKDRLIWLCQRCVQDRQNIVKSV
LEAADEQSRNLRIHRLSKLCQLCLQLIIHSSPDENVNPALRVLEIFTSCSTFESDGSPNS
TSPIPNGIVAQIFRFLIHRRYFECLRALCDSRIPPLIEVTPKPPTPMAEIILDLISRPLK
LLSQTDQNFRSEMVRRLGSAFFQTEFSEQVRNFILPALSETKFPYLDWISALNREENLAN
PWLLFSFLSLGRLNLEVFSPMEVIQYLNVLSKLSVSISKGSKYAKIQIDDDPEESDDDND
DDPNGDGSTISPEERECLQGSLNLLNSTEVVSNLIAATELCAKEPLALKLLCRICHNLLL
ADKAAIHKFRLLNTLAFRSALIHRLWNLILDAKQPSAIGKPVPLLTVISRGIRMSKTERN
TIAPLMAVFSALFGYLLVTINDTEFYGDMANGGPLRTQQSVWMPFNLEELVPMSLSLRDV
TLGLVELAFPESRPTIREEYQFAVRSVRDNQDEHVTKSDALLNEDEETQIWSHMFKKTVL
LVRQLYTRDTRRQFCPDDHWICNHITLPLDRPHDISLRRSRLRQYRPFQGLRVFTREELE
EEGPPLSTKEVRLATILREMPYAVSFPQRILVFSNLVSRDKQEHQGERVNFMSGPAINIL
VRRNYLYEDAFDKLSPENEPNLRLKMRINLMNAAGLNEAGIDGGGLFREFMTELLKTAFD
PNRGFFRLTKDQLLYPNPTVEQIEPDFTPHYYFIGRALGKALYENHLVELPLASFFLSKL
LGQHSVNVDIDHLSSLDPELYKNLLYLKTYEGDVLDLGLDFTMVSEEVGKTSVHELRPGG
ADTPVNNENRIEYIHLVADYKLNRQIRAQCNAFRQGLSDVINLDWLRMFSYRELQTLISG
AEHEINVDDLARCTKYGNGFDEDHPTIQIFWRVVKGLTEPQKRCLLKFVTSCSRPPLLGF
KELEPPFAIQNVGHESERLPTASTCMNLLKLPEFKDEETLRTKLLYAIESGAGFELS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtttcaatggcgaatttcgccgcaaacctgtcatcaatatccgtggggcatcc
aagtccgctcacaaggatgaattggtggagaacgcccaaaaggaacgccaaaagcgagag
aaattccgtgtggatactcggagtgcgaatgtgattcaaagtgggattcgttcgtttctg
actcgttgttccatctatgagcactggcgaggccaattcgacgagtttaaggcggcccaa
aattatgcgccagcttggatccgcatcaatttctttttcaaggtccaatccgataaggac
cgattgatctggttgtgtcaaagatgcgttcaggaccgtcagaatattgtcaaatccgtg
ctcgaggctgcggacgagcagtctcgcaatctgcggatccatcgtctgtccaagttgtgc
caactttgtctccaattaatcatccactcttccccggacgagaatgtgaatcctgctctt
cgagtcctcgagatattcacctcgtgctccacatttgagagcgatggatctcccaactcc
acttcacccattccgaacgggattgttgcccagattttccggttcttgattcatcgtcgt
tatttcgagtgtctccgagccttgtgcgattctcgcatcccgcccctcattgaagtcacg
cccaaacctcccacgcccatggccgagatcatcctggatttgatctctcgaccgttgaag
ctcttgagccaaaccgatcaaaacttccgatccgaaatggtccgacgtttaggcagtgcc
ttctttcagacggaattctcggagcaagttcggaacttcatccttcccgctctgagtgaa
acgaaattcccatacttggactggatttcagccttgaatcgggaggagaacctggccaat
ccttggctccttttctcattcttgtccttgggtcgccttaatttggaagtgttttctcca
atggaagtcatccaatatctgaacgtgttaagcaaattgagcgtctccatctccaagggg
tccaagtacgctaagattcaaatcgacgacgatcctgaagagtccgacgacgacaacgac
gatgatccgaatggggatggatcgactatctcgccggaggaacgggaatgcttgcaagga
agtttgaacttgctgaatagcaccgaggtcgtatccaacttgattgccgccacggaactt
tgtgccaaagagcctttggccttgaagctactctgtcggatctgccataatctcctcttg
gcggacaaggccgccatccacaagttccgattgttgaacacgctcgccttcagatcggca
ttgattcatcgcctctggaatctgattctagacgccaaacaaccttcggccatcggcaaa
ccagttcctctattaaccgtcatttctcggggtattcgaatgagcaagaccgaacggaac
acaatcgctcctttgatggccgtgttttcggctctcttcggataccttctagtcacgatc
aacgacaccgagttctacggcgacatggccaacgggggcccgttaaggacccaacagagc
gtgtggatgccgttcaacttggaggagctggtccccatgtcattatccttgcgagatgtc
accctcggattggtcgaactggctttccccgaatcaagacccaccattcgagaagagtat
caatttgcagttagatcggttcgggacaaccaagatgagcacgtgaccaaaagtgacgca
cttttgaatgaggacgaggagacccagatctggtcgcacatgttcaagaagacagttctc
ctggttcgacagctctacacgagggacactcggcgacaattctgccctgacgaccactgg
atttgtaaccatatcaccctccccttggaccgacctcatgacatttctctgcgaagatct
cgacttcgccagtatcgtcccttccaaggactccgggtctttacccgcgaggaattggag
gaggagggccctccgttgtccaccaaggaagttcgattggccacgattcttcgagaaatg
ccgtatgcggtctcgtttcctcaacgaatattggtcttttccaatttggtttctcgtgac
aaacaggagcatcagggcgagcgtgtcaatttcatgagtggtcccgctatcaacatcctc
gttcggcgaaactatctctacgaagatgccttcgataagctctccccggaaaacgagccc
aatttgcggttaaaaatgcggatcaacctgatgaatgcggcaggcttgaacgaagccgga
attgacggcggaggcttatttcgggagttcatgacagagcttctcaaaaccgcctttgac
ccgaatcgaggcttctttcgcctcacgaaagaccaactactctatcctaatccaaccgtg
gaacaaatcgagccggattttactccccactactattttatcggaagggcgttgggcaag
gcgttgtacgagaaccatctcgtagaactacccttggccagtttcttcctctccaagctc
ttggggcaacattcggtcaacgtggacatcgatcatttgtcctccttggatccagagctc
tacaagaatctcctgtacttaaagacttatgaaggcgatgttttagacctgggtttggat
ttcacaatggtctccgaggaagtgggcaaaacctctgtccacgaattgagaccaggtgga
gcggacacgcccgtcaacaacgagaatcgcatcgagtacatccatttggtggctgactac
aaactcaaccgacaaatccgagctcaatgcaacgctttcagacaagggttaagcgatgtg
attaacctagattggttgagaatgttcagttatcgtgaactgcagaccctgatctcaggc
gccgagcacgagatcaatgtggacgatttggcgcgatgtaccaaatacggtaacggtttc
gacgaagatcatcccacaattcagatattttggagagtggtcaagggcctcactgaaccg
caaaagagatgcttgctcaaattcgttaccagttgctcgagaccacctttactcggattc
aaggaattggagcctccgtttgccatacaaaatgtgggacacgagtccgaacgacttcct
accgcaagcacgtgcatgaatctcctgaagctgcccgagtttaaagacgaagagacatta
cggaccaaattgttgtacgccatcgaatcgggggctggttttgaactcagttaa
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