Tigriopus californicus (tidepool copepod): 131893443
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Entry
131893443 CDS
T09700
Name
(RefSeq) putative neutral sphingomyelinase
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00600
Sphingolipid metabolism
tcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
131893443
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
131893443
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
131893443
NCBI-ProteinID:
XP_059099459
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Position
2:3169256..3171851
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AA seq
425 aa
AA seq
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MSSLVGEGKLDPTSVEIRVFTLNCWGLRLISSDRKERFEAIGHYLSRGDHDIVFLQEVWN
QSDYDAVKEAIQDAFPHSHFFDNGVIGTGTCVFTRVQIHDATLHEFAMNGYPHKITHGDW
FGGKGLGVCHIFYKGYDVHLYTSHYHAEYNRAHDIYLGHRVSHALESAQWIKLTSSSADL
TIYAGDFNTEPTDVPYRLLRAVAALSDSWLEANGTETSGWTSEIPSNSYTTPRALRECPN
GKRIDYIMYRSGPNVLAAPVSTILPLPSRIPNRNFSYSDHEAVCTTLRLQRTENSFLRAS
EFRRHLSMECRIDCVKAVKDAIGITEVSQRKVSEVQVIYAIVAAVLLSLFVGSFFPIFIV
DYEYHAYLDVGLFLPRFFISIALVFFFLMATVFTKKEMNALRSTKASLRLIMDQDLSNNG
NNMIS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgttggtgggcgagggcaaattggacccgacgtcggtggagatccgcgtgttt
acgctcaattgttggggcttgcgtttgatctcgtcggatcggaaggagcggtttgaggcc
attgggcactatctgagtcgaggggatcacgacatcgtgttcctgcaagaggtctggaac
caatccgattacgacgccgtcaaagaggccatccaggatgcgtttccacactcgcacttc
ttcgacaacggagtcattggcacgggcacgtgcgtctttacccgggtccaaatccacgac
gccaccttacacgagtttgccatgaacggttacccgcacaagatcacccatggggactgg
ttcggcggcaagggcttgggcgtctgtcacatcttctacaaaggctacgatgtgcatctg
tacacgtcgcactatcacgccgaatacaatcgcgctcacgacatttacttaggccatcgg
gtctcgcacgccctcgagagcgctcaatggatcaagttgacctcgagctcagctgacttg
acgatttatgccggggactttaacaccgagcccacggacgtgccctaccgcttactgcgg
gcggtggcggctctgtctgactcctggctggaagccaatggaaccgagacgagcggttgg
accagtgagatccccagcaactcctacaccacgccccgagcgttgcgggagtgtcccaat
ggcaaacggatcgattacatcatgtaccgatcgggtccgaacgtgttggccgcgcccgtg
agcacaatattgccgctcccgtcgcggatcccgaaccgcaatttcagctattcggatcat
gaagccgtgtgcacgaccctgaggctccagcgaactgaaaacagtttcttgcgagcttcg
gaattccgtcgccatttgagcatggagtgccgaattgattgtgtcaaagccgtgaaggat
gccattggcatcacggaggtctcccaaagaaaagtgtccgaggttcaagtcatttacgcc
attgtggcggccgttctcctctccctctttgtgggctccttcttcccgatcttcattgtc
gactatgagtaccacgcctatttggatgtgggtctctttttgccccggttctttatcagt
atcgccttggtctttttctttctgatggccaccgtattcaccaagaaggaaatgaatgcc
cttcgatccaccaaagccagcctaaggctgataatggaccaggatttgagcaacaacggg
aacaacatgatcagttga
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