Tigriopus californicus (tidepool copepod): 131893462
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Entry
131893462 CDS
T09700
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05041
solute carrier family 6 (neurotransmitter transporter, creatine) member 8
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131893462
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
131893462
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Gene cluster
GFIT
Motif
Pfam:
SNF
DUF4381
Motif
Other DBs
NCBI-GeneID:
131893462
NCBI-ProteinID:
XP_059099482
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Position
2:complement(3233565..3241815)
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AA seq
651 aa
AA seq
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MVVTDQSNHREDGAHLTSYIIVPPSEEETSPTKEGLGNVPKRDVWGNGMEFVLACVGFAV
GLGNIWRFPYLCYKNGGGAFLVPYFVYVIGGGIPMLFLEVGLGQFMSQGNISIWNICPIF
KGIGIGTTIMAGICNIYYIVVLAWALHYFFASFGSELPWASCGNLWNTDHCLAIGSNHSD
VTGHATDPVVEYWENRVLGVTNGLEEVGGLQWELVGTLLLAWILVYGCIFKGVHSSGKVV
YFTSTFPYLMLVVLFIRGVTLPGAMNGLIFYLKPDFTKLMQSQVWIDAGTQVFYSYCVAF
GGMVALGSFNKYHRDFVRDCSIIASINAFSSMFGGCVIFSVLGYMSYISGIPIDQVAESG
PGLAFIVYPKAVSLMPAAPLWAILFFFMILLVAIDSQFVTCEGVITAFMDHPKAVSLMPA
APLWAILFFFMILLVAIDSQFVTCEGVITAFMDHFSTRFNFRYAREITSGIYCLVSFLFA
LPMVSQGGIYVFQIFDYYSASGMVLLSFTFCECVAIAWFYGVNNWCKNVEDMIGRPVNMW
IKFCWTFLTPFLSMGLLIFSIVQYTPLTYNNTYTYPIWGQLIGAALGIASTVFVPLYFLY
AIIMAPGVKLAEKFHQTTIPQMEETLHHRSQQRKSQKANIDSQELQSLTVT
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgacggatcaaagcaaccatcgagaagatggagcccatctcacttcttacata
atagttccaccgagtgaagaagagacctcgcctaccaaagaaggccttggaaacgtgccc
aaaagagacgtgtggggcaatggaatggaatttgtcttggcgtgcgtaggatttgccgtg
ggcttgggcaatatttggcgatttccatatctgtgttataagaatggaggcggagcgttc
ctggttccttattttgtatatgtgatcggaggagggatccctatgttgttcttggaggtg
ggattgggtcaattcatgagccaagggaatatttccatttggaacatttgtcccatattc
aaaggaatcggaattggaacaaccatcatggccggcatttgcaacatctattacatcgtg
gtcctcgcttgggcccttcactacttcttcgccagttttggatcggaacttccttgggcc
tcttgtggcaacctatggaacacggaccactgtttagcaattgggtctaaccattctgat
gtcactggccacgccacggatccagtggtcgaatattgggaaaaccgggttcttggcgtg
actaatggcttggaggaggtgggtgggttacaatgggaacttgtgggcaccctcctcctg
gcctggattctggtgtacggctgcattttcaagggcgtccactcctccgggaaagtggtc
tatttcacgtccactttcccctaccttatgttagttgtgctcttcattcggggcgttacc
ctgccgggtgcaatgaacggactcatcttttacctcaaaccagatttcaccaaactgatg
caatctcaggtctggattgatgcggggacccaggtcttctattcctattgcgtggctttt
ggaggcatggtggccttagggtcgttcaataagtatcatcgagactttgttcgagattgc
tccatcatcgctagcatcaacgccttttcgtccatgtttggtggttgtgtgatcttttcg
gtccttggctatatgagctatatctctggaattcccattgatcaagtggcagagtcaggt
cctggtttggcctttattgtctacccaaaggctgtgtccctaatgccagcggctccattg
tgggccatcttgttcttcttcatgatcttgttggtggccattgattctcaattcgtcact
tgtgaaggagtgatcacagcctttatggaccacccaaaggctgtgtccctaatgccagcg
gctccattgtgggccatcttgttcttcttcatgatcttgttggtggccattgattctcaa
ttcgtcacttgtgaaggagtgatcacagcctttatggaccatttctcgacgaggttcaat
ttccgatatgctcgtgagatcacctctggcatttactgtttggtcagtttcctgtttgcg
ttaccgatggtttcgcagggtggaatctacgtattccaaatctttgattattactcggcg
agtggaatggttctacttagtttcacattctgcgagtgcgtggccattgcttggttttat
ggtgtcaataactggtgcaaaaatgtggaggatatgattggcagaccggtgaacatgtgg
attaaattctgttggacgttcctcacaccctttctcagcatgggtttgctgatcttttca
atcgtacaatacaccccactaacttacaacaacacctacacctatccgatttggggtcaa
ctaattggtgccgccctcgggatcgcgtccactgtatttgtgcctctttacttcttgtac
gctatcatcatggcccctggagtgaaactggcagagaaatttcatcaaaccacaatccct
caaatggaggagacactgcatcaccggtctcaacaaagaaaatcccagaaagcgaatatc
gattcgcaagagttgcaatccctcacggtgacataa
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