Tigriopus californicus (tidepool copepod): 131893508
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Entry
131893508 CDS
T09700
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131893508
04121 Ubiquitin system [BR:
tcf04121
]
131893508
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
90S particles
Other 90S particles
131893508
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131893508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
eIF2A
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
BBS2_Mid
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_SCAP
KNTC1_N
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
131893508
NCBI-ProteinID:
XP_059099540
LinkDB
All DBs
Position
2:complement(10236391..10239277)
Genome browser
AA seq
449 aa
AA seq
DB search
MKVKMLRRDNADYLRETKHDIHKIPRSFHPDAHPHDAGREYVRALNAVKLERVFAKPLMG
ALDGHGDAISALALHCQRLTWMASSAADGQIRFWDLMTKKTLIKAKGHDTFTRGITFDPA
GEFLWSVGDDKTVKSWRIADVPVEPQPASTLPPHQTFIGQKMMTGLSHQVGEPILATCGE
NTSLWNTEMHTVVREYQWGVDSIHDIKFNPTETHILGACASDRSILLYDVRERNPMRKVI
MELRSNEMSWNPMEPFVFAVANEDYNVYSFDIRSLKKPLIVHMDHTAAVIGLDYSPTGKE
IVAGSYDKTIRIFKCDEGHSREVYHTKRMQRLTCVAWTKDNKYILSGSDEMNIRMWKAKA
WEKLGPLKDRQKSALDYNDKLKEKFASHPKVRRIARHRQVPKHVMNARKEHQIIRESKKR
KEANRRQHSKPGAVPYVPEREKHVIEEQE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaaatgttgcggcgtgacaacgcggattatctgcgcgagacgaaacacgat
attcataagattccacggagtttccatccggacgctcacccgcacgatgcgggtcgagag
tatgtgcgggccctcaatgccgtcaaattggagagagtcttcgccaagcctctcatgggc
gcgttagatgggcacggcgatgccatttcggccttggccttgcattgtcaacgcttgact
tggatggcctcgagtgcagctgatgggcagatccgcttttgggacttgatgaccaagaag
accttgatcaaggccaaaggccacgatacattcactcggggtatcacctttgatccggcg
ggggaattcttgtggagtgtcggggacgacaaaaccgtgaaatcgtggcgcatagctgat
gtgcccgtggaaccgcagcccgcctccactttacctccgcatcagactttcatcggccag
aaaatgatgaccggtctcagccatcaagtaggtgagcccattctagccacttgcggcgaa
aacacctccctgtggaatacggaaatgcacaccgtagtgcgggaataccaatggggcgtg
gattccattcatgacatcaagttcaacccaaccgaaacgcacattttgggcgcctgcgcc
tcggaccgatccatcttgttatacgatgtgcgcgagcgcaatcccatgcgcaaagtcatc
atggagcttcggtccaatgaaatgtcttggaacccgatggaaccgttcgtattcgccgtg
gccaatgaggattacaacgtctactcatttgacatccggagtctgaagaagcccctcatt
gtacatatggatcacacggccgcggtcattggcctagattactcccccacgggcaaggag
atcgtggcgggaagctacgacaaaaccatccggatcttcaagtgcgatgaaggccattcg
cgtgaggtctatcacacgaaacgcatgcaacgcctgacatgcgtggcctggaccaaggac
aataagtacatactctcgggttcggatgagatgaacatccgcatgtggaaggccaaagcc
tgggaaaaactcggtcccttgaaggatcgacagaaatcggccttagactacaacgataag
ctcaaggagaaattcgcgtcgcatccgaaagtcagacgcatcgctcgacatcgtcaagta
cccaaacacgtgatgaacgccaggaaggagcaccaaatcatccgtgagtccaagaagcgg
aaagaggccaatcggaggcaacattccaaaccgggcgccgttccatatgttcctgagagg
gaaaaacatgtcattgaagagcaagaataa
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