Tigriopus californicus (tidepool copepod): 131893554
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Entry
131893554 CDS
T09700
Name
(RefSeq) beta-1,4-galactosyltransferase 7-like
KO
K00733
xylosylprotein 4-beta-galactosyltransferase [EC:
2.4.1.133
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tcf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
tcf01100
Metabolic pathways
Module
tcf_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
131893554
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
131893554
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tcf01003
]
131893554
Enzymes [BR:
tcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.133 xylosylprotein 4-beta-galactosyltransferase
131893554
Glycosyltransferases [BR:
tcf01003
]
Glycan extension
O-Glycan
131893554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7C
Glyco_transf_7N
HOK_GEF
Motif
Other DBs
NCBI-GeneID:
131893554
NCBI-ProteinID:
XP_059099593
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All DBs
Position
2:complement(2417812..2419076)
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AA seq
307 aa
AA seq
DB search
MARIVFIRRRMVYALLSACLTLLILSWMARSSTWMSDSHQLCFLVPFRDRFDELSEFVPH
LSRFLSSQNVPFRMFVLNQIDEFRFNRGALLNAGFDFVSRNTDCDYVALHDVDLYPMNPG
LDYGHPGTVVRHLAAPGLHPKYDYPNFLGGIVLIGMSTFRSVNGLTNNFWGWGLEDDDFR
ARLQEAGIVIERPEGLTSGTTQTFKHHHTQRRRPRDYRRCYNQRDFTRRRDRNSGLSNLE
YELTSHRKMTVDGFAFDVLSLKLVCDKKLTPFCDCHNAPVEESPIRPVPPEDKIVPQVKP
KRTVKTL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcatcgtattcatccgtcgtcggatggtttacgccctgttatccgcgtgtctg
accctcctgatcctttcctggatggctaggtcgtccacttggatgtcggattcccatcag
ttatgcttcctcgtgcctttccgggaccgatttgatgagctctccgaatttgtgccgcat
ctctcgcgcttcttaagttcccaaaacgtgccttttcgaatgtttgtcctgaaccaaatc
gacgagtttcgattcaatcgaggagcgctgcttaatgccggatttgatttcgtctcgcgg
aatacagattgtgattacgtggccttacacgacgtggatctgtatccaatgaatccgggg
ttggattacggccatcccggaaccgtggtgagacatctggccgctcctggactgcatccc
aaatacgattaccccaattttctgggcggaatcgttctcattggcatgagcacgtttcga
agcgtgaatggtttgaccaataatttttggggttggggattggaggatgacgatttccga
gcccgactccaagaagccgggatagtcattgaaagacccgaagggctgacctcgggcacg
actcaaaccttcaagcaccaccacacccaaaggcgacgcccacgggattatcggcgttgc
tacaatcaacgagatttcacccggcgaagagaccgaaattccggattgagcaatctcgag
tatgagttaacatctcatcggaagatgaccgtggacgggttcgccttcgatgtcttgagc
ttaaagcttgtctgtgataagaaattgacgcctttctgcgattgccacaatgctcccgtc
gaggaatcgccgattcgacccgtgccgcccgaagacaaaatcgtgccccaggttaagccc
aaacggacagtgaagaccctatag
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