KEGG   Tigriopus californicus (tidepool copepod): 131893555
Entry
131893555         CDS       T09700                                 
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    131893555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcf04121]
    131893555
   03400 DNA repair and recombination proteins [BR:tcf03400]
    131893555
Ubiquitin system [BR:tcf04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     131893555
   Cul5 complex
     131893555
DNA repair and recombination proteins [BR:tcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     131893555
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Ubiquitin_4 MobL
Other DBs
NCBI-GeneID: 131893555
NCBI-ProteinID: XP_059099594
LinkDB
Position
2:2412637..2414752
AA seq 118 aa
MDVFLMIRRRKTTMFLDAKETTTVLDLKRMIEGITKKPPNQQRLYNREDVVMKDERTLSD
YGLTSTMAKAQSPAEVGLAFQENGSWEDLEKTPYSSPPELPDVMKPGQESAAQETATA
NT seq 357 nt   +upstreamnt  +downstreamnt
atggacgtgttcctgatgatccgccgtcggaagacgaccatgttcctggatgcgaaggag
acgaccacggtgctggacctcaagcggatgattgagggcatcaccaagaaaccacccaac
caacagaggctctataatcgcgaggacgttgtgatgaaggacgagcgaactctgtctgat
tacggcctaacctcgaccatggccaaagctcagagtccggccgaagtgggcctggctttc
caagagaacggcagttgggaggacctcgagaaaacgccctactcctccccgcccgaattg
cccgacgtcatgaagcccggccaagaatctgctgctcaagagacagccaccgcctag

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