Tigriopus californicus (tidepool copepod): 131893565
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Entry
131893565 CDS
T09700
Name
(RefSeq) egalitarian protein homolog isoform X1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131893565
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
131893565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH_Egal
DNA_pol_A_exo1
DUF6446
TTHB210-like
Med3
Motif
Other DBs
NCBI-GeneID:
131893565
NCBI-ProteinID:
XP_059099603
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All DBs
Position
2:6905890..6910907
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AA seq
799 aa
AA seq
DB search
MCERERNILTHPKMETEDYEYVRNLTILFFLEKLLDKGESRSLHDLSCQFGTKGFSKEMR
QIAGGSKAGLKKFLLEYPSLFAVQDDQVSVAKVSVADDVDGSGGPKRDYGHEAMLYFKDK
LVQYGEGIEVPIKSLLGHRSQAPPQVRHVSGQHFKEFSDFLARFPEEFVVGEETIYLKQY
EGTVMRKYCEQPEGQDDDDDDEEGGGAGVGPRVGHKAVNEELKNNIVKYLKSCLSDNDPD
PTNLDELFNDVMDNFSTDHELPFRTVLDLRTFLKMYPQHFQVQGKLVELAVTVSKSSLNN
GPNSNSNTNTNNNNIAVGANSNDGTPRARRSKADGMSFNPMASLKDRINSVVKQVVADNT
FKERADAPRFDYQTWCSNVIQSAKIIRSVEEGRSLCENILKSHDVVALDVKGMNLGVEGR
ITSIHLNTMDCSPLVFDLITLPTLLTEGRLKDVLETDRIVKVIHDCRNSSASLWHQYNIC
LKNVFDTQAAYAVLQYQEDLSPVYKVKNTSLSSLCKLYKISGHEMIEQNRSTYKRDQKFW
TRRPFDQEMILVLASDLLALVPQLYATMKRQILDSHMELFNDLCEEQVMLYVDPENVKER
KKQRKIELEIEDIKQKLSTANGKNIVLSNREIRLLRYIELTEESKNLIKGSAKVAKKLER
LTSKPDNDDPEDNNAGSNPPSLESVSSGLSSDNSANSPMHSTVDGKSSVLMGRALSANSV
NDIIMPGRTQEIDRIEKLEAMIANISKFGGSTENIALRAPFQPQTTAFTKPAVVVEKRSV
ETQTVSTGDIVITKVYSSE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagagagagcgaaacattcttacacacccaaagatggagacggaagactatgaa
tatgtgagaaatctgaccatcctgttcttcttggaaaaattgctcgataagggtgagtcc
cgaagtctccacgatctgagctgccaattcggaaccaagggattcagcaaagaaatgcgt
caaattgccggtggatccaaagccggactcaaaaagttcctcctcgagtacccatccttg
ttcgcggtccaagatgaccaagtgtccgtcgccaaagtgagtgtcgcagacgacgtggat
ggatccggagggcccaaacgagattatggccatgaggccatgctctacttcaaagacaag
ctagtgcaatatggcgaaggcattgaggtgcccatcaaaagccttctgggtcacaggtcg
caggccccgcctcaagtgcgtcatgtgtcgggacagcatttcaaggaattcagcgacttc
ctcgcccgttttccggaggagttcgtcgtcggtgaagagaccatctatctcaagcaatac
gaaggcacggtcatgcgaaaatattgcgaacagcccgaagggcaggacgacgatgacgac
gatgaggagggaggaggggcgggagttgggcctagggtgggccacaaggctgtgaacgaa
gagctgaagaataacattgtcaagtatctgaagtcatgtttgtcagacaatgaccccgac
cccaccaatttagatgagctcttcaacgatgtcatggacaatttctcgaccgaccacgag
ttacccttccgaaccgtgctcgacctgagaacatttctcaagatgtacccccaacacttc
caggtgcaagggaaacttgtggagctggcagtcacggtttccaaaagctccctcaacaat
ggtcccaatagcaatagtaacaccaacaccaacaacaacaatatcgctgtgggagccaac
agtaacgatggcacccctcgagcacgtcgttccaaggccgatggcatgtccttcaacccc
atggctagcctaaaagatcgcatcaattccgtggtcaagcaagtggtggctgataacacg
ttcaaagagcgagcagacgcgccccgattcgattatcaaacttggtgctcaaacgtgata
caaagtgcaaaaatcatccgtagcgtcgaagagggacgctctttgtgcgagaacattttg
aaatcccacgatgtcgtggccttagatgtcaagggaatgaatttgggcgtggagggccga
attacatcgatacatctgaacacaatggattgcagtccgttggttttcgacttgatcact
ctacccacattgctaaccgagggaaggctgaaagacgtcttggaaacggacaggattgtc
aaggtgattcacgattgccgaaactcctctgcttcgttgtggcatcaatacaacatctgt
ctcaaaaatgtatttgacacccaggccgcctacgcagtccttcaatatcaagaagacttg
agtcccgtttacaaagtcaagaacacgtcgcttagttcactctgcaaactgtacaagatc
agtgggcatgaaatgatcgagcaaaatagaagtacttacaagcgcgaccaaaagttctgg
acacgacgaccgttcgaccaagagatgattttggttttggcttcggatttattggctctg
gtgccgcagctgtatgccaccatgaagagacaaatcctcgattcgcacatggagctgttc
aatgatctatgcgaggaacaagtcatgctctatgtggatccagagaacgtgaaagagcgg
aaaaagcagcggaaaatcgaactcgagattgaggatatcaagcagaagttgtccaccgcc
aatggaaagaacattgtcctgagtaatcgggagattcggcttctcagatatattgaactc
accgaggaaagtaagaatctcatcaaaggctcggccaaagtggccaaaaagctggaaaga
ctcacgagcaaacccgacaacgatgaccctgaagacaacaatgccggatccaacccaccg
agtctcgagtctgtatcctcgggattgagctcagataactccgccaactcgcccatgcat
tccactgtcgatgggaagtcgtcggttcttatgggcagggccttgtccgccaactccgtg
aatgatatcattatgcccgggcgaacgcaagaaattgaccgcattgagaagctcgaagcc
atgatcgccaacatctcgaagtttggcggttccaccgaaaacattgctctccgagcacct
ttccaacctcagaccactgccttcaccaaaccagcagttgttgtggagaagagaagtgtg
gaaacacaaacagtgtccacaggagatattgtgatcaccaaagtatattctagtgaatga
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