Tigriopus californicus (tidepool copepod): 131893606
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Entry
131893606 CDS
T09700
Name
(RefSeq) orexin/Hypocretin receptor type 1-like isoform X1
KO
K04238
hypocretin (orexin) receptor 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
131893606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tcf04030
]
131893606
G protein-coupled receptors [BR:
tcf04030
]
Rhodopsin family
Peptide
Orexin
131893606
BRITE hierarchy
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7tm_4
DUF3938
Motif
Other DBs
NCBI-GeneID:
131893606
NCBI-ProteinID:
XP_059099681
LinkDB
All DBs
Position
2:3421779..3456214
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AA seq
546 aa
AA seq
DB search
MSLADPVLYSYDEDPLGGFGGNDVDDYALSLDMNYSNVDGSLMGNHSLNCSLCLNELCLS
AEDYAIYKSWVGVDTYEMVLISINLIVFLTGVIGNSLVFIAVTTTKSMQSVTNIFIVNLA
LADVLVMLFCAPPSIIWDVTNTWIFGSLMCRIVIYIQDTSVSVSVLTLTFIAYDRYHAIC
RPLQFSSKKTKAAGVIAGIWGISCMIGIPNAVTLHLVSPFKDLPCRDEDVLFDLSTCRPS
WNEEFDVTFIILKAILLYSLPLSFMSVAYYYICKTLWRRNNIPGTQETPTEGHSSHINGS
TSSSVNLLTRTHFAFRSATVRLSTNSNSTGGNPSMIAAPETRLHHCTNRTLDNQLKTRRK
VAKMLIVVVVMFSLNMFPVHMLPIVNYFVDKNMTQDSEAHERVTQVLMAAGIVTHCMCYF
NSAINPIIYYFMSAQFKAQYRRILSCRCTADSPSPKTNHRNLLHQQDGGSNGNNCRRAGS
SRTEDLPSRHLRSRSCLSGPTRIMKGESSSNNVGAGNLYGSSTRRVLRHPNFGAELQIPR
PNDNMC
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggccgatccagtattatatagttacgacgaggaccctttgggaggattcggt
ggtaatgatgttgatgactacgcgctatccctggacatgaactattcgaatgtggatggg
tcactcatggggaaccattcgttgaattgctccctgtgcttaaatgagctgtgcttgagt
gccgaggactacgccatctacaaaagctgggtgggtgtggatacgtatgaaatggtgctc
atctccatcaatttgatcgtcttcttgaccggcgtcattgggaactcgttggtgtttatt
gcggtcaccaccacgaagtccatgcagtcagtcacgaacattttcatcgtcaatttggca
ttagctgacgttctggtgatgctcttctgtgctccaccctccatcatctgggacgtgacg
aacacgtggatattcgggtctctcatgtgccggatcgttatctatattcaggatacctct
gtttccgtgtccgttttgacgttgaccttcatagcgtacgatcgctaccacgccatctgt
cggccattgcagttctcctcgaaaaagaccaaagcggctggagtgattgcgggcatctgg
ggaatttcgtgtatgattggcatccccaatgcggtgacgctccatttggtctcgccgttc
aaggaccttccatgtcgtgatgaagatgtgttgttcgatctttcaacctgtcggccatct
tggaacgaggagtttgatgtcactttcatcatcttgaaggccattcttttatacagcctt
cctctgtctttcatgtcggtagcatattattacatatgcaagacactttggagacgaaat
aacattccaggaacgcaagaaacgcccacggagggccacagcagtcatatcaatgggagc
acgtccagctcagtcaatcttctgaccagaacccattttgcattcaggtctgccacggtc
cggctttccacgaattcaaactcgacaggtgggaacccttccatgattgccgcacccgag
actcgactccatcattgtaccaaccgaaccttggacaatcaactcaagaccaggcggaaa
gtggccaagatgttgattgtggtcgtcgtcatgttcagtctcaacatgtttcccgtccac
atgctacccatcgttaactatttcgtggacaaaaacatgacccaggacagtgaggcccac
gagagagtgactcaggttctcatggcagcaggaattgtcacacattgcatgtgctacttc
aattccgccattaaccccatcatttactacttcatgtccgcccaattcaaggctcaatat
cgccggatcttatcttgccgatgcacggccgattcacccagtcccaaaactaatcaccgc
aatcttcttcaccaacaagacggagggtcgaacggcaataattgccgcagagcgggttct
agtcgaacggaagacctgcccagccgccaccttcgatctcgttcctgcctatccggcccg
accagaataatgaaaggggagagcagttcgaacaatgtgggcgcgggaaatttgtacgga
tcgtccacccggcgagtcctgaggcaccctaatttcggagccgagctccagattccccga
cctaacgataatatgtgctga
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